RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 REXO2Q9Y3B8 237 aaKnown RBP15.51■□□□□ 0.07
TNF-208ENST00000449264 ADGRG1Q9Y653 693 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.51■□□□□ 0.07
TNF-208ENST00000449264 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.51■□□□□ 0.07
TNF-208ENST00000449264 LCA5LO95447 670 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 CCDC175P0C221 793 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 NOMO3P69849 1222 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 PLCB3Q01970 1234 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 RSPO2Q6UXX9 243 aaPredicted RBP15.51■□□□□ 0.07
TNF-208ENST00000449264 KIAA1328Q86T90 577 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 LRRTM3Q86VH5 581 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 TTC30AQ86WT1 665 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 FUKQ8N0W3 1084 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 PIK3R5Q8WYR1 880 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 B3GNT5Q9BYG0 378 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 RHOBTB2Q9BYZ6 727 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 ZCWPW1Q9H0M4 648 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 NKX2-4Q9H2Z4 354 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 KRT82Q9NSB4 513 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 TMLHEQ9NVH6 421 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 MSRAQ9UJ68 235 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 CDY1Q9Y6F8 540 aa15.51■□□□□ 0.07
TNF-208ENST00000449264 CDH23Q9H251 3354 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 OR6C75A6NL08 312 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 LSM8O95777 96 aaKnown RBP15.5■□□□□ 0.07
TNF-208ENST00000449264 CYP1A1P04798 512 aaPredicted RBP15.5■□□□□ 0.07
TNF-208ENST00000449264 BMP8BP34820 402 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 NSFP46459 744 aaKnown RBP15.5■□□□□ 0.07
TNF-208ENST00000449264 KRT83P78385 493 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 DSG1Q02413 1049 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 MAPRE1Q15691 268 aaKnown RBP15.5■□□□□ 0.07
TNF-208ENST00000449264 FAM171BQ6P995 826 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 FAM35AQ86V20 835 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 DCP1BQ8IZD4 617 aaKnown RBP15.5■□□□□ 0.07
TNF-208ENST00000449264 C17orf53Q8N3J3 647 aaPredicted RBP15.5■□□□□ 0.07
TNF-208ENST00000449264 TMEM35BQ8NCS4 154 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 SECISBP2LQ93073 1101 aaKnown RBP15.5■□□□□ 0.07
TNF-208ENST00000449264 PGLYRP2Q96PD5 576 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 TGS1Q96RS0 853 aaKnown RBP15.5■□□□□ 0.07
TNF-208ENST00000449264 PKMYT1Q99640 499 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 HNRNPABQ99729 332 aaKnown RBP15.5■□□□□ 0.07
TNF-208ENST00000449264 PLVAPQ9BX97 442 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 PACSIN1Q9BY11 444 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 ZNF518BQ9C0D4 1074 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 CERS4Q9HA82 394 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.5■□□□□ 0.07
TNF-208ENST00000449264 MTRRQ9UBK8 725 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 NENFQ9UMX5 172 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 TFR2Q9UP52 801 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 PPP2R2CQ9Y2T4 447 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 PCDHA13Q9Y5I0 950 aa15.5■□□□□ 0.07
TNF-208ENST00000449264 FAM200BP0CF97 657 aa15.49■□□□□ 0.07
TNF-208ENST00000449264 UNGP13051 313 aaPredicted RBP15.49■□□□□ 0.07
TNF-208ENST00000449264 ABCB4P21439 1286 aa15.49■□□□□ 0.07
TNF-208ENST00000449264 MAGEA1P43355 309 aa15.49■□□□□ 0.07
TNF-208ENST00000449264 BCAT1P54687 386 aa15.49■□□□□ 0.07
TNF-208ENST00000449264 TAP1Q03518 808 aa15.49■□□□□ 0.07
TNF-208ENST00000449264 RAB30Q15771 203 aa15.49■□□□□ 0.07
TNF-208ENST00000449264 PPP2R2DQ66LE6 453 aa15.49■□□□□ 0.07
TNF-208ENST00000449264 SPATA2LQ8IUW3 424 aaPredicted RBP15.49■□□□□ 0.07
TNF-208ENST00000449264 FBXO22Q8NEZ5 403 aa15.49■□□□□ 0.07
TNF-208ENST00000449264 ZBP1Q9H171 429 aa15.49■□□□□ 0.07
TNF-208ENST00000449264 LUC7LQ9NQ29 371 aaKnown RBP15.49■□□□□ 0.07
TNF-208ENST00000449264 ENTPD7Q9NQZ7 604 aa15.49■□□□□ 0.07
TNF-208ENST00000449264 MRPL17Q9NRX2 175 aaKnown RBP15.49■□□□□ 0.07
TNF-208ENST00000449264 TRMT1Q9NXH9 659 aaKnown RBP15.49■□□□□ 0.07
TNF-208ENST00000449264 ABI2Q9NYB9 513 aaPredicted RBP15.49■□□□□ 0.07
TNF-208ENST00000449264 MYO7AQ13402 2215 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 MYO9BQ13459 2157 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 A0A0U1RQJ8 604 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 ADAM12O43184 909 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 RTN2O75298 545 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 AP1G2O75843 785 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 FTLP02792 175 aaPredicted RBP15.48■□□□□ 0.07
TNF-208ENST00000449264 GZMAP12544 262 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 MLLT1Q03111 559 aaPredicted RBP15.48■□□□□ 0.07
TNF-208ENST00000449264 CENPCQ03188 943 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 PDE4CQ08493 712 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 BST2Q10589 180 aaKnown RBP15.48■□□□□ 0.07
TNF-208ENST00000449264 C2CD6Q53TS8 623 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 C4orf50Q6ZRC1 276 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 PAQR9Q6ZVX9 377 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 TMC7Q7Z402 723 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 ANKRD52Q8NB46 1076 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 ATRIPQ8WXE1 791 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 SMARCD1Q96GM5 515 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 TCF25Q9BQ70 676 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 C11orf70Q9BRQ4 267 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 C11orf84Q9BUA3 381 aaPredicted RBP15.48■□□□□ 0.07
TNF-208ENST00000449264 LHX5Q9H2C1 402 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 ST7Q9NRC1 585 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 STK39Q9UEW8 545 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 CYTH4Q9UIA0 394 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 ATP8B3O60423 1300 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.48■□□□□ 0.07
TNF-208ENST00000449264 C5orf67F2Z3F1 127 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 TULP2O00295 520 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 TBC1D4O60343 1298 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 H2AFZP0C0S5 128 aa15.48■□□□□ 0.07
TNF-208ENST00000449264 CTSAP10619 480 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms