RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 HCFC1R1Q9NWW0 138 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 COL4A3Q01955 1670 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 BICDL2A1A5D9 508 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 IKBKBO14920 756 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 HCRTO43612 131 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 STAU1O95793 577 aaKnown RBP15.58■□□□□ 0.08
USP39-206ENST00000448971 C4BPAP04003 597 aaKnown RBP15.58■□□□□ 0.08
USP39-206ENST00000448971 ALDH1A3P47895 512 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 GCLMP48507 274 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 DUSP4Q13115 394 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 PAK1Q13153 545 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 PDAP1Q13442 181 aaKnown RBP15.58■□□□□ 0.08
USP39-206ENST00000448971 ZNF528Q3MIS6 628 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 ZACNQ401N2 412 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 ZNF667Q5HYK9 610 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 SV2AQ7L0J3 742 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 DPH6Q7L8W6 267 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 OSTM1Q86WC4 334 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 TTC9BQ8N6N2 239 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 ITFG1Q8TB96 612 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 SPPL2BQ8TCT7 592 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 C2orf15Q8WU43 125 aaKnown RBP15.58■□□□□ 0.08
USP39-206ENST00000448971 NELFBQ8WX92 580 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 SYT15Q9BQS2 421 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 CORO1BQ9BR76 489 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 OSBPL6Q9BZF3 934 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 CRISPLD1Q9H336 500 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 KIAA1468Q9P260 1216 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 DNMT3BQ9UBC3 853 aaKnown RBP15.58■□□□□ 0.08
USP39-206ENST00000448971 SLC27A5Q9Y2P5 690 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 ACACBO00763 2458 aa15.58■□□□□ 0.08
USP39-206ENST00000448971 SOAT2O75908 522 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 VNN2O95498 520 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 RHOP08100 348 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 P4HA1P13674 534 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 BMP6P22004 513 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 WARSP23381 471 aaKnown RBP15.57■□□□□ 0.08
USP39-206ENST00000448971 MXI1P50539 228 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 EPHB3P54753 998 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 PSMC1P62191 440 aaKnown RBP15.57■□□□□ 0.08
USP39-206ENST00000448971 PRKCQQ04759 706 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 SMARCB1Q12824 385 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 VEPH1Q14D04 833 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 NFE2Q16621 373 aaPredicted RBP15.57■□□□□ 0.08
USP39-206ENST00000448971 CCDC40Q4G0X9 1142 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 PDZD4Q76G19 769 aaPredicted RBP15.57■□□□□ 0.08
USP39-206ENST00000448971 CCDC150Q8NCX0 1101 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 OR6B3Q8NGW1 331 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 FAM200AQ8TCP9 573 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 KBTBD7Q8WVZ9 684 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 ING5Q8WYH8 240 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 ZNF512Q96ME7 567 aaPredicted RBP15.57■□□□□ 0.08
USP39-206ENST00000448971 ACBD6Q9BR61 282 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 XYLT2Q9H1B5 865 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 SNX25Q9H3E2 840 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 ASAH2Q9NR71 780 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 LMBRD1Q9NUN5 540 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 FBXO4Q9UKT5 387 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 MRPS23Q9Y3D9 190 aaKnown RBP15.57■□□□□ 0.08
USP39-206ENST00000448971 PCDHB5Q9Y5E4 795 aa15.57■□□□□ 0.08
USP39-206ENST00000448971 FAM170BA6NMN3 283 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 GABRDO14764 452 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 STX10O60499 249 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 VNN1O95497 513 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 HLA-DRAP01903 254 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 PTPN2P17706 415 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 STX17P56962 302 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 ENPEPQ07075 957 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 PPP3CAQ08209 521 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 MLF2Q15773 248 aaPredicted RBP15.56■□□□□ 0.08
USP39-206ENST00000448971 C1orf220Q5T0J3 134 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 MTSS1LQ765P7 747 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 LRRTM3Q86VH5 581 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 SPATA2LQ8IUW3 424 aaPredicted RBP15.56■□□□□ 0.08
USP39-206ENST00000448971 ELMO3Q96BJ8 720 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 MRPL45Q9BRJ2 306 aaKnown RBP15.56■□□□□ 0.08
USP39-206ENST00000448971 PI4K2AQ9BTU6 479 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 SMYD3Q9H7B4 428 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 TMEM8AQ9HCN3 771 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.56■□□□□ 0.08
USP39-206ENST00000448971 CEP72Q9P209 647 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 HSFX1Q9UBD0 423 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 CDH9Q9ULB4 789 aa15.56■□□□□ 0.08
USP39-206ENST00000448971 A8MXQ7 604 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 PPP1R3GB7ZBB8 358 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 TACC1O75410 805 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 MYL4P12829 197 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 CD72P21854 359 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 RAP1GAPP47736 663 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 TUFMP49411 452 aaKnown RBP15.55■□□□□ 0.08
USP39-206ENST00000448971 PSEN1P49768 467 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 NOP14P78316 857 aaKnown RBP15.55■□□□□ 0.08
USP39-206ENST00000448971 FZD5Q13467 585 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 TAF12Q16514 161 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 CCDC142Q17RM4 750 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 SLC5A9Q2M3M2 681 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 SGSM1Q2NKQ1 1148 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 CYP4A22Q5TCH4 519 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 KRT39Q6A163 491 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 TTI2Q6NXR4 508 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms