RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 EPAS1Q99814 870 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 FAM86B1E9PN63 330 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 F5H5T6 163 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 SNX2O60749 519 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 FAM86B2P0C5J1 330 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 CXCL8P10145 99 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 PTENP60484 403 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 IRX5P78411 483 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 SMAD3P84022 425 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 FOXM1Q08050 763 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 EFEMP1Q12805 493 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 TRIM14Q14142 442 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 TBC1D25Q3MII6 688 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 GRAMD4Q6IC98 578 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 DENND5BQ6ZUT9 1274 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 GRASPQ7Z6J2 395 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 CNGA4Q8IV77 575 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 DNAJC1Q96KC8 554 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 NIF3L1Q9GZT8 377 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 STXBP5LQ9Y2K9 1186 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 A0A1W2PPC1 479 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 TRIM66O15016 1216 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ATP2C1P98194 919 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 FAM46CQ5VWP2 391 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 RRAGAQ7L523 313 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 UNC45BQ8IWX7 931 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 RMDN1Q96DB5 314 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZMAT2Q96NC0 199 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 BBS2Q9BXC9 721 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 DNAJC17Q9NVM6 304 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 HES2Q9Y543 173 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 SQORQ9Y6N5 450 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ADGRA3Q8IWK6 1321 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 PP2D1A8MPX8 630 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 PDZK1P1A8MUH7 402 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 TBC1D4O60343 1298 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ENDOD1O94919 500 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 CSTF2P33240 577 aaKnown RBP eCLIP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 NASPP49321 788 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 FXR2P51116 673 aaKnown RBP eCLIP5.91□□□□□ -1.465e-7■■■■■ 31.5
CDC42BPA-209ENST00000448940 PTK2BQ14289 1009 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 SYTL3Q4VX76 610 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 BZW1Q7L1Q6 419 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 TEX19Q8NA77 164 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ATP11CQ8NB49 1132 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 GIMAP7Q8NHV1 300 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 SNIP1Q8TAD8 396 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 PI4K2AQ9BTU6 479 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 CCSER1Q9C0I3 900 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 PDE11AQ9HCR9 933 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 MUTYHQ9UIF7 546 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 TRPM3Q9HCF6 1732 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 KRT86O43790 486 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 GJB5O95377 273 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 CNPP09543 421 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ITGAXP20702 1163 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 DPP6P42658 865 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ITIH3Q06033 890 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ACTN3Q08043 901 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 TOB2Q14106 344 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 SEZ6Q53EL9 994 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 HECTD3Q5T447 861 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ECHDC2Q86YB7 292 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 PRR11Q96HE9 360 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 RPRD1AQ96P16 312 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 CNPPD1Q9BV87 410 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 CALN1Q9BXU9 219 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 SAE1Q9UBE0 346 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ITGA11Q9UKX5 1188 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ASGR2P07307 311 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 CREB1P16220 341 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 NDUFV2P19404 249 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 GARTP22102 1010 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 POLR2FP61218 127 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 PNOCQ13519 176 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 E4F1Q66K89 784 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 RETSATQ6NUM9 610 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 UBALD2Q8IYN6 164 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 TMA16Q96EY4 203 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 SLC13A1Q9BZW2 595 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 DNAJC25Q9H1X3 360 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 PLEKHA5Q9HAU0 1116 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 DMAP1Q9NPF5 467 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ANKRD12Q6UB98 2062 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 A0A1W2PQ27 194 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 A0A1W2PQ64 194 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 A0A1W2PQD8 194 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 FAM155AB1AL88 458 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 H0YHG0 523 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 MEIS2O14770 477 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 RNASEH2AO75792 299 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 CCR3P51677 355 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 GSDMDP57764 484 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 MTA1Q13330 715 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ARSJQ5FYB0 599 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 SPIRE2Q8WWL2 714 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ACBD3Q9H3P7 528 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZFYVE1Q9HBF4 777 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 DCNP07585 359 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms