RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TASP1Q9H6P5 420 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 ANO10Q9NW15 660 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 THG1LQ9NWX6 298 aaKnown RBP14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 DPP3Q9NY33 737 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 PCDHB13Q9Y5F0 798 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 ANK1P16157 1881 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 UBE4BO95155 1302 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 CLIC2O15247 247 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 PAPSS2O95340 614 aaPredicted RBP14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 NFICP08651 508 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 ALCAMQ13740 583 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 KNOP1Q1ED39 458 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 MGAT5BQ3V5L5 792 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 SLC39A12Q504Y0 691 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 LAIR1Q6GTX8 287 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 STXBP4Q6ZWJ1 553 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 DCP1BQ8IZD4 617 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 SYNPOQ8N3V7 929 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 MLKLQ8NB16 471 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 ZSWIM2Q8NEG5 633 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 OR10T2Q8NGX3 314 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 SPPL2BQ8TCT7 592 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 BPIFB1Q8TDL5 484 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 RSPRY1Q96DX4 576 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 MKNK1Q9BUB5 465 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 EXOC7Q9UPT5 735 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 RALGAPA1Q6GYQ0 2036 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 SDK1Q7Z5N4 2213 aa14.76□□□□□ -0.05
PDLIM2-213ENST00000448520 SPTBN2O15020 2390 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 TPRP12270 2363 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 NCANO14594 1321 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 MED19A0JLT2 244 aaPredicted RBP14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 SOBPA7XYQ1 873 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 SPECC1L-ADORA2AF8WAN1 911 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 LRP3O75074 770 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 IL18RAPO95256 599 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 TGM1P22735 817 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 ZNF445P59923 1031 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 PAK1Q13153 545 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 SV2CQ496J9 727 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 ZCWPW2Q504Y3 356 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 COBLL1Q53SF7 1204 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 STXBP5Q5T5C0 1151 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 ANKRD40Q6AI12 368 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 LRSAM1Q6UWE0 723 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 TTC9BQ8N6N2 239 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 POMGNT1Q8WZA1 660 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 EEF2KMTQ96G04 330 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 SEPT5Q99719 369 aaPredicted RBP14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 CBWD1Q9BRT8 395 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 USP18Q9UMW8 372 aa14.75□□□□□ -0.05
PDLIM2-213ENST00000448520 ZNF638Q14966 1978 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 SLC38A8A6NNN8 435 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 KPNA7A9QM74 516 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 PSMA7O14818 248 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 SOAT2O75908 522 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 LDHAP00338 332 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 RETP07949 1114 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 HAPLN1P10915 354 aaPredicted RBP14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 DDX6P26196 483 aaKnown RBP eCLIP14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 HOXA6P31267 233 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 CTHP32929 405 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 PNPLA4P41247 253 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 ATXN1P54253 815 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 SATB1Q01826 763 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 STIM1Q13586 685 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 GAS6Q14393 721 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 WSCD1Q658N2 575 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 TTI2Q6NXR4 508 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 GPIHBP1Q8IV16 184 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 CACTINQ8WUQ7 758 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 DHTKD1Q96HY7 919 aaPredicted RBP14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 ZNF560Q96MR9 790 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 LRRC3BQ96PB8 259 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 DUSP9Q99956 384 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 LPIN3Q9BQK8 851 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 RTKNQ9BST9 563 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 TSPY26PQ9H489 355 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 PCIF1Q9H4Z3 704 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 AGPAT3Q9NRZ7 376 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 GTSE1Q9NYZ3 720 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 CDV3Q9UKY7 258 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 DNAH14Q0VDD8 3507 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 COL4A2P08572 1712 aa14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 NUP210Q8TEM1 1887 aaPredicted RBP14.74□□□□□ -0.05
PDLIM2-213ENST00000448520 GOLGA8IPA6NC78 632 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 GOLGA8JA6NMD2 632 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 ADSSP30520 456 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 CYP2J2P51589 502 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 AMPD2Q01433 879 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 TSPY1Q01534 308 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 SIM2Q14190 667 aaPredicted RBP14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 NFE2Q16621 373 aaPredicted RBP14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 ITPRIPL2Q3MIP1 535 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 CRELD2Q6UXH1 353 aaPredicted RBP14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 LRRTM3Q86VH5 581 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 LONP2Q86WA8 852 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 GAS2L3Q86XJ1 694 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 SAAL1Q96ER3 474 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 SLC46A2Q9BY10 475 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms