RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 BACH2Q9BYV9 841 aa30.35■■■□□ 2.45
CBX4-202ENST00000448310 TRIM9Q9C026 710 aa30.35■■■□□ 2.45
CBX4-202ENST00000448310 EBF3Q9H4W6 596 aa30.35■■■□□ 2.45
CBX4-202ENST00000448310 ABCB6Q9NP58 842 aa30.35■■■□□ 2.45
CBX4-202ENST00000448310 TDP1Q9NUW8 608 aa30.35■■■□□ 2.45
CBX4-202ENST00000448310 KBTBD4Q9NVX7 518 aa30.35■■■□□ 2.45
CBX4-202ENST00000448310 RALGAPA1Q6GYQ0 2036 aa30.34■■■□□ 2.45
CBX4-202ENST00000448310 OTOL1A6NHN0 477 aaPredicted RBP30.34■■■□□ 2.45
CBX4-202ENST00000448310 GABRDO14764 452 aa30.34■■■□□ 2.45
CBX4-202ENST00000448310 TGM1P22735 817 aa30.34■■■□□ 2.45
CBX4-202ENST00000448310 FOXD4L5Q5VV16 416 aaPredicted RBP30.34■■■□□ 2.45
CBX4-202ENST00000448310 STXBP4Q6ZWJ1 553 aa30.34■■■□□ 2.45
CBX4-202ENST00000448310 MON1AQ86VX9 555 aa30.34■■■□□ 2.45
CBX4-202ENST00000448310 GPR161Q8N6U8 529 aaKnown RBP30.34■■■□□ 2.45
CBX4-202ENST00000448310 FOXD4L4Q8WXT5 416 aaPredicted RBP30.34■■■□□ 2.45
CBX4-202ENST00000448310 HSPBP1Q9NZL4 362 aa30.34■■■□□ 2.45
CBX4-202ENST00000448310 ZNF233A6NK53 670 aa30.33■■■□□ 2.45
CBX4-202ENST00000448310 HRO43593 1189 aa30.33■■■□□ 2.45
CBX4-202ENST00000448310 ATP2C2O75185 946 aa30.33■■■□□ 2.45
CBX4-202ENST00000448310 NOL4O94818 638 aa30.33■■■□□ 2.45
CBX4-202ENST00000448310 LHX1P48742 406 aa30.33■■■□□ 2.45
CBX4-202ENST00000448310 ASIC1P78348 528 aa30.33■■■□□ 2.45
CBX4-202ENST00000448310 RUNX3Q13761 415 aa30.33■■■□□ 2.45
CBX4-202ENST00000448310 SPATA2LQ8IUW3 424 aaPredicted RBP30.33■■■□□ 2.45
CBX4-202ENST00000448310 SCN4BQ8IWT1 228 aa30.33■■■□□ 2.45
CBX4-202ENST00000448310 CHFRQ96EP1 664 aa30.33■■■□□ 2.45
CBX4-202ENST00000448310 HPDLQ96IR7 371 aa30.33■■■□□ 2.45
CBX4-202ENST00000448310 R3HCC1Q9Y3T6 440 aaKnown RBP30.33■■■□□ 2.45
CBX4-202ENST00000448310 PTPRDP23468 1912 aa30.32■■■□□ 2.44
CBX4-202ENST00000448310 KIAA0391O15091 583 aaKnown RBP30.32■■■□□ 2.44
CBX4-202ENST00000448310 PPP6R2O75170 966 aa30.32■■■□□ 2.44
CBX4-202ENST00000448310 PAPSS2O95340 614 aaPredicted RBP30.32■■■□□ 2.44
CBX4-202ENST00000448310 TNNC2P02585 160 aa30.32■■■□□ 2.44
CBX4-202ENST00000448310 ARSAP15289 507 aa30.32■■■□□ 2.44
CBX4-202ENST00000448310 PCSK1P29120 753 aa30.32■■■□□ 2.44
CBX4-202ENST00000448310 SPEM2Q0P670 501 aa30.32■■■□□ 2.44
CBX4-202ENST00000448310 MYO1EQ12965 1108 aa30.32■■■□□ 2.44
CBX4-202ENST00000448310 SIM2Q14190 667 aaPredicted RBP30.32■■■□□ 2.44
CBX4-202ENST00000448310 LAIR1Q6GTX8 287 aa30.32■■■□□ 2.44
CBX4-202ENST00000448310 PKN3Q6P5Z2 889 aa30.32■■■□□ 2.44
CBX4-202ENST00000448310 SPATA18Q8TC71 538 aa30.32■■■□□ 2.44
CBX4-202ENST00000448310 ZNF396Q96N95 335 aaPredicted RBP30.32■■■□□ 2.44
CBX4-202ENST00000448310 LRRC27Q9C0I9 530 aa30.32■■■□□ 2.44
CBX4-202ENST00000448310 KIF9Q9HAQ2 790 aa30.32■■■□□ 2.44
CBX4-202ENST00000448310 TRPC7Q9HCX4 862 aa30.32■■■□□ 2.44
CBX4-202ENST00000448310 LMO2P25791 158 aa30.31■■■□□ 2.44
CBX4-202ENST00000448310 PSMC1P62191 440 aaKnown RBP30.31■■■□□ 2.44
CBX4-202ENST00000448310 CFAP221Q4G0U5 840 aa30.31■■■□□ 2.44
CBX4-202ENST00000448310 SHC4Q6S5L8 630 aa30.31■■■□□ 2.44
CBX4-202ENST00000448310 TTC16Q8NEE8 873 aa30.31■■■□□ 2.44
CBX4-202ENST00000448310 KBTBD7Q8WVZ9 684 aa30.31■■■□□ 2.44
CBX4-202ENST00000448310 TRMT2BQ96GJ1 504 aaKnown RBP30.31■■■□□ 2.44
CBX4-202ENST00000448310 UXTQ9UBK9 157 aaPredicted RBP30.31■■■□□ 2.44
CBX4-202ENST00000448310 NCOR2Q9Y618 2525 aa30.31■■■□□ 2.44
CBX4-202ENST00000448310 SURF1Q15526 300 aa30.3■■■□□ 2.44
CBX4-202ENST00000448310 DUOXA2Q1HG44 320 aa30.3■■■□□ 2.44
CBX4-202ENST00000448310 FSTL4Q6MZW2 842 aa30.3■■■□□ 2.44
CBX4-202ENST00000448310 EPM2AIP1Q7L775 607 aaPredicted RBP30.3■■■□□ 2.44
CBX4-202ENST00000448310 LONP2Q86WA8 852 aa30.3■■■□□ 2.44
CBX4-202ENST00000448310 SYNPOQ8N3V7 929 aa30.3■■■□□ 2.44
CBX4-202ENST00000448310 RDH13Q8NBN7 331 aa30.3■■■□□ 2.44
CBX4-202ENST00000448310 SLC22A12Q96S37 553 aa30.3■■■□□ 2.44
CBX4-202ENST00000448310 CYP2S1Q96SQ9 504 aa30.3■■■□□ 2.44
CBX4-202ENST00000448310 SYT15Q9BQS2 421 aa30.3■■■□□ 2.44
CBX4-202ENST00000448310 CUEDC2Q9H467 287 aa30.3■■■□□ 2.44
CBX4-202ENST00000448310 SPTBN2O15020 2390 aa30.29■■■□□ 2.44
CBX4-202ENST00000448310 EIF3DO15371 548 aaKnown RBP eCLIP30.29■■■□□ 2.44
CBX4-202ENST00000448310 LMNB2Q03252 620 aa30.29■■■□□ 2.44
CBX4-202ENST00000448310 FOXD4L6Q3SYB3 417 aaPredicted RBP30.29■■■□□ 2.44
CBX4-202ENST00000448310 TMEM196Q5HYL7 178 aa30.29■■■□□ 2.44
CBX4-202ENST00000448310 FAM26FQ5R3K3 315 aa30.29■■■□□ 2.44
CBX4-202ENST00000448310 CC2D1AQ6P1N0 951 aaPredicted RBP30.29■■■□□ 2.44
CBX4-202ENST00000448310 FAM171BQ6P995 826 aa30.29■■■□□ 2.44
CBX4-202ENST00000448310 FOXD4L3Q6VB84 417 aaPredicted RBP30.29■■■□□ 2.44
CBX4-202ENST00000448310 LIMS2Q7Z4I7 341 aa30.29■■■□□ 2.44
CBX4-202ENST00000448310 MYLPFQ96A32 169 aa30.29■■■□□ 2.44
CBX4-202ENST00000448310 FUBP3Q96I24 572 aaKnown RBP eCLIP30.29■■■□□ 2.44
CBX4-202ENST00000448310 MYRFLQ96LU7 910 aa30.29■■■□□ 2.44
CBX4-202ENST00000448310 CRTAC1Q9NQ79 661 aa30.29■■■□□ 2.44
CBX4-202ENST00000448310 HELZP42694 1942 aaKnown RBP30.29■■■□□ 2.44
CBX4-202ENST00000448310 SDK1Q7Z5N4 2213 aa30.28■■■□□ 2.44
CBX4-202ENST00000448310 SOBPA7XYQ1 873 aa30.28■■■□□ 2.44
CBX4-202ENST00000448310 TGFB1I1O43294 461 aa30.28■■■□□ 2.44
CBX4-202ENST00000448310 CUTAO60888 179 aa30.28■■■□□ 2.44
CBX4-202ENST00000448310 YEATS4O95619 227 aa30.28■■■□□ 2.44
CBX4-202ENST00000448310 CASP1P29466 404 aa30.28■■■□□ 2.44
CBX4-202ENST00000448310 AMPD3Q01432 767 aa30.28■■■□□ 2.44
CBX4-202ENST00000448310 ZNF268Q14587 947 aaPredicted RBP30.28■■■□□ 2.44
CBX4-202ENST00000448310 DPH6Q7L8W6 267 aa30.28■■■□□ 2.44
CBX4-202ENST00000448310 WDR49Q8IV35 697 aa30.28■■■□□ 2.44
CBX4-202ENST00000448310 NELFCDQ8IXH7 590 aa30.28■■■□□ 2.44
CBX4-202ENST00000448310 IQUBQ8NA54 791 aa30.28■■■□□ 2.44
CBX4-202ENST00000448310 ZNF507Q8TCN5 953 aa30.28■■■□□ 2.44
CBX4-202ENST00000448310 AGPAT3Q9NRZ7 376 aa30.28■■■□□ 2.44
CBX4-202ENST00000448310 CLIC2O15247 247 aa30.27■■■□□ 2.44
CBX4-202ENST00000448310 PDGFRBP09619 1106 aa30.27■■■□□ 2.44
CBX4-202ENST00000448310 DLATP10515 647 aaKnown RBP30.27■■■□□ 2.44
CBX4-202ENST00000448310 ATXN1P54253 815 aaKnown RBP30.27■■■□□ 2.44
CBX4-202ENST00000448310 MTF1Q14872 753 aa30.27■■■□□ 2.44
CBX4-202ENST00000448310 NAIF1Q69YI7 327 aaPredicted RBP30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms