RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 HMGXB4Q9UGU5 601 aa17.15■□□□□ 0.34
OTUB1-204ENST00000447683 GOLGA8SH3BPF8 625 aa17.15■□□□□ 0.34
OTUB1-204ENST00000447683 STAU1O95793 577 aaKnown RBP17.15■□□□□ 0.34
OTUB1-204ENST00000447683 HOXD8P13378 290 aaPredicted RBP17.15■□□□□ 0.34
OTUB1-204ENST00000447683 PSMA2P25787 234 aa17.15■□□□□ 0.34
OTUB1-204ENST00000447683 GABRB2P47870 512 aa17.15■□□□□ 0.34
OTUB1-204ENST00000447683 PSMC1P62191 440 aaKnown RBP17.15■□□□□ 0.34
OTUB1-204ENST00000447683 OASLQ15646 514 aaKnown RBP17.15■□□□□ 0.34
OTUB1-204ENST00000447683 KYNUQ16719 465 aa17.15■□□□□ 0.34
OTUB1-204ENST00000447683 GSTA5Q7RTV2 222 aa17.15■□□□□ 0.34
OTUB1-204ENST00000447683 YTHDF3Q7Z739 585 aaKnown RBP17.15■□□□□ 0.34
OTUB1-204ENST00000447683 ATXN2LQ8WWM7 1075 aaKnown RBP17.15■□□□□ 0.34
OTUB1-204ENST00000447683 FAM124BQ9H5Z6 455 aaPredicted RBP17.15■□□□□ 0.34
OTUB1-204ENST00000447683 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.15■□□□□ 0.34
OTUB1-204ENST00000447683 C2CD2Q9Y426 696 aa17.15■□□□□ 0.34
OTUB1-204ENST00000447683 LRRD1A4D1F6 860 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 BTBD19C9JJ37 291 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 H3BRB1 525 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 TSPAN1O60635 241 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 LRCH4O75427 683 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 ERBB2P04626 1255 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 CETPP11597 493 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 P4HA1P13674 534 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 VCPP55072 806 aaKnown RBP17.14■□□□□ 0.33
OTUB1-204ENST00000447683 TMEM132DQ14C87 1099 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 LONRF1Q17RB8 773 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 C6orf89Q6UWU4 347 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 CEP128Q6ZU80 1094 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 PRUNE1Q86TP1 453 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 ZCCHC9Q8N567 271 aaKnown RBP17.14■□□□□ 0.33
OTUB1-204ENST00000447683 PWWP2AQ96N64 755 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 SELENOSQ9BQE4 189 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 TUT1Q9H6E5 874 aaKnown RBP17.14■□□□□ 0.33
OTUB1-204ENST00000447683 ZNF148Q9UQR1 794 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 RALGAPA2Q2PPJ7 1873 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 A0A1B0GUA9 196 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.14■□□□□ 0.33
OTUB1-204ENST00000447683 DNALI1O14645 258 aaPredicted RBP17.14■□□□□ 0.33
OTUB1-204ENST00000447683 MICAL2O94851 1124 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 KRT7P08729 469 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 VDRP11473 427 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 GCLCP48506 637 aaPredicted RBP17.14■□□□□ 0.33
OTUB1-204ENST00000447683 INCA1Q0VD86 236 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 CNGA2Q16280 664 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 TAZQ16635 292 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 QPCTQ16769 361 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 P3H1Q32P28 736 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 MARCH8Q5T0T0 291 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 TAOK1Q7L7X3 1001 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 TADA2BQ86TJ2 420 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 EXOC3L1Q86VI1 746 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 NT5DC4Q86YG4 428 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 KIAA0319LQ8IZA0 1049 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 GLIS1Q8NBF1 620 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 MCRS1Q96EZ8 462 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 HPDLQ96IR7 371 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 DNAJC17Q9NVM6 304 aaKnown RBP17.14■□□□□ 0.33
OTUB1-204ENST00000447683 ITGA11Q9UKX5 1188 aa17.14■□□□□ 0.33
OTUB1-204ENST00000447683 HMGCRP04035 888 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 ITGAVP06756 1048 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 DRD4P21917 467 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 ORC1Q13415 861 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 SLC35B2Q8TB61 432 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 NLRP7Q8WX94 980 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 ACSF2Q96CM8 615 aaPredicted RBP17.13■□□□□ 0.33
OTUB1-204ENST00000447683 ZNF317Q96PQ6 595 aaPredicted RBP17.13■□□□□ 0.33
OTUB1-204ENST00000447683 CCDC134Q9H6E4 229 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 DDX20Q9UHI6 824 aaKnown RBP17.13■□□□□ 0.33
OTUB1-204ENST00000447683 AGAP1Q9UPQ3 857 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 GLTPD2A6NH11 291 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 IL1R2P27930 398 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 GPD2P43304 727 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 GRIK4Q16099 956 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 HADHQ16836 314 aaKnown RBP17.13■□□□□ 0.33
OTUB1-204ENST00000447683 ZNF410Q86VK4 478 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 CHMP6Q96FZ7 201 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 ACAP3Q96P50 834 aa17.13■□□□□ 0.33
OTUB1-204ENST00000447683 METTL5Q9NRN9 209 aaKnown RBP17.13■□□□□ 0.33
OTUB1-204ENST00000447683 H0YHG0 523 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 GTF2A2P52657 109 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 SARNPP82979 210 aaKnown RBP17.12■□□□□ 0.33
OTUB1-204ENST00000447683 RBP5P82980 135 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 ACAP1Q15027 740 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 DUSP28Q4G0W2 176 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 DPP3Q9NY33 737 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 BARX2Q9UMQ3 279 aaPredicted RBP17.12■□□□□ 0.33
OTUB1-204ENST00000447683 SCN1AP35498 2009 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 CCL15-CCL14A0A0B4J2E2 113 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 ANKRD33BA6NCL7 494 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 MMP3P08254 477 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 ABHD2P08910 425 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 SMPD1P17405 629 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 ATP5DP30049 168 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 GRM5P41594 1212 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 ARSEP51690 589 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 CCL15Q16663 113 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 CCDC142Q17RM4 750 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 ANKRD23Q86SG2 305 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 TTC39CQ8N584 583 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 BRI3BPQ8WY22 251 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms