RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 SMG5Q9UPR3 1016 aaKnown RBP19.52■□□□□ 0.72
COL9A1-205ENST00000447041 UBE4BO95155 1302 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 ATP2C2O75185 946 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 NOL4O94818 638 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 DDX6P26196 483 aaKnown RBP eCLIP19.51■□□□□ 0.71
COL9A1-205ENST00000447041 PCSK1P29120 753 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 CYP2J2P51589 502 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 PLCB2Q00722 1185 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 LRRC32Q14392 662 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 SNRNP35Q16560 246 aaKnown RBP19.51■□□□□ 0.71
COL9A1-205ENST00000447041 DUOXA2Q1HG44 320 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 CFAP221Q4G0U5 840 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 MAMSTRQ6ZN01 415 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 LIMS2Q7Z4I7 341 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 SPATA2LQ8IUW3 424 aaPredicted RBP19.51■□□□□ 0.71
COL9A1-205ENST00000447041 USP13Q92995 863 aaPredicted RBP19.51■□□□□ 0.71
COL9A1-205ENST00000447041 FAM126AQ9BYI3 521 aaPredicted RBP19.51■□□□□ 0.71
COL9A1-205ENST00000447041 MAGEF1Q9HAY2 307 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 KIAA1586Q9HCI6 787 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 NCDNQ9UBB6 729 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 ZMYM5Q9UJ78 669 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 R3HCC1Q9Y3T6 440 aaKnown RBP19.51■□□□□ 0.71
COL9A1-205ENST00000447041 ZNF638Q14966 1978 aaKnown RBP19.51■□□□□ 0.71
COL9A1-205ENST00000447041 OTOGLQ3ZCN5 2332 aa19.51■□□□□ 0.71
COL9A1-205ENST00000447041 SPTBN4Q9H254 2564 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 DLATP10515 647 aaKnown RBP19.5■□□□□ 0.71
COL9A1-205ENST00000447041 LMO2P25791 158 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 AFMP43652 599 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 ME1P48163 572 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 RPL10AP62906 217 aaKnown RBP19.5■□□□□ 0.71
COL9A1-205ENST00000447041 CUL4BQ13620 913 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 RESP18Q5W5W9 173 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 TRIM68Q6AZZ1 485 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 TRAPPC11Q7Z392 1133 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 GRAMD1CQ8IYS0 662 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 SPRYD3Q8NCJ5 442 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 MRPS31Q92665 395 aaKnown RBP19.5■□□□□ 0.71
COL9A1-205ENST00000447041 MYLPFQ96A32 169 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 RMDN1Q96DB5 314 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 TRMT2BQ96GJ1 504 aaKnown RBP19.5■□□□□ 0.71
COL9A1-205ENST00000447041 CGRRF1Q99675 332 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 SYT15Q9BQS2 421 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 SLC39A2Q9NP94 309 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 HPS4Q9NQG7 708 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 THG1LQ9NWX6 298 aaKnown RBP19.5■□□□□ 0.71
COL9A1-205ENST00000447041 WDR87Q6ZQQ6 2873 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 PTPRDP23468 1912 aa19.5■□□□□ 0.71
COL9A1-205ENST00000447041 GREB1Q4ZG55 1949 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 EP300Q09472 2414 aaPredicted RBP19.49■□□□□ 0.71
COL9A1-205ENST00000447041 CXCL12P48061 93 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 DNM1Q05193 864 aaKnown RBP19.49■□□□□ 0.71
COL9A1-205ENST00000447041 CYP24A1Q07973 514 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 PPP2R5DQ14738 602 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 ITPRIPL2Q3MIP1 535 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 FAM171BQ6P995 826 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 DPH6Q7L8W6 267 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 MON1AQ86VX9 555 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 SCN4BQ8IWT1 228 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 SPEM1Q8N4L4 309 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 CCDC127Q96BQ5 260 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 FUBP3Q96I24 572 aaKnown RBP eCLIP19.49■□□□□ 0.71
COL9A1-205ENST00000447041 FAM83CQ9BQN1 747 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 EBF3Q9H4W6 596 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 CRTAC1Q9NQ79 661 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 GKN1Q9NS71 199 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 TDP1Q9NUW8 608 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 C2orf42Q9NWW7 574 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 FAM13BQ9NYF5 915 aa19.49■□□□□ 0.71
COL9A1-205ENST00000447041 UXTQ9UBK9 157 aaPredicted RBP19.49■□□□□ 0.71
COL9A1-205ENST00000447041 OTOL1A6NHN0 477 aaPredicted RBP19.48■□□□□ 0.71
COL9A1-205ENST00000447041 CST3P01034 146 aaPredicted RBP19.48■□□□□ 0.71
COL9A1-205ENST00000447041 TNNI1P19237 187 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 WARSP23381 471 aaKnown RBP19.48■□□□□ 0.71
COL9A1-205ENST00000447041 DMWDQ09019 674 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 CCINQ13939 588 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 PSMD6Q15008 389 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 BMT2Q1RMZ1 405 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 DGKKQ5KSL6 1271 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 XXYLT1Q8NBI6 393 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 CHFRQ96EP1 664 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 MYRFLQ96LU7 910 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 FNBP1Q96RU3 617 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 SLC22A12Q96S37 553 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 MMS19Q96T76 1030 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 GZF1Q9H116 711 aaPredicted RBP19.48■□□□□ 0.71
COL9A1-205ENST00000447041 KIF9Q9HAQ2 790 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 TRPC7Q9HCX4 862 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 CDH9Q9ULB4 789 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 NME7Q9Y5B8 376 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 ANAPC1Q9H1A4 1944 aa19.48■□□□□ 0.71
COL9A1-205ENST00000447041 PDGFRBP09619 1106 aa19.47■□□□□ 0.71
COL9A1-205ENST00000447041 PDIA4P13667 645 aaKnown RBP19.47■□□□□ 0.71
COL9A1-205ENST00000447041 ARSAP15289 507 aa19.47■□□□□ 0.71
COL9A1-205ENST00000447041 HOXC13P31276 330 aa19.47■□□□□ 0.71
COL9A1-205ENST00000447041 MAGEA11P43364 429 aa19.47■□□□□ 0.71
COL9A1-205ENST00000447041 NRLP54845 237 aa19.47■□□□□ 0.71
COL9A1-205ENST00000447041 RUNX3Q13761 415 aa19.47■□□□□ 0.71
COL9A1-205ENST00000447041 C4orf50Q6ZRC1 276 aa19.47■□□□□ 0.71
COL9A1-205ENST00000447041 HS2ST1Q7LGA3 356 aa19.47■□□□□ 0.71
COL9A1-205ENST00000447041 MRPL45Q9BRJ2 306 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms