RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 PNPLA4P41247 253 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 TSPY1Q01534 308 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 GRSF1Q12849 480 aaKnown RBP eCLIP15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 BFSP1Q12934 665 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 NFE2Q16621 373 aaPredicted RBP15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 SOWAHAQ2M3V2 549 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 LMBRD2Q68DH5 695 aaPredicted RBP15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 SV2BQ7L1I2 683 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 KBTBD6Q86V97 674 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 LEO1Q8WVC0 666 aaPredicted RBP15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 GAB3Q8WWW8 586 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 MRPS31Q92665 395 aaKnown RBP15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 MYRFLQ96LU7 910 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 ZNF560Q96MR9 790 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 OLFML3Q9NRN5 406 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 GDAP2Q9NXN4 497 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 RBAKQ9NYW8 714 aaPredicted RBP15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 SEL1LQ9UBV2 794 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 CCDC39Q9UFE4 941 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 SNX9Q9Y5X1 595 aa15.23■□□□□ 0.03
SMARCAL1-210ENST00000445153 RALGAPA1Q6GYQ0 2036 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 FRMD3A2A2Y4 597 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 SOBPA7XYQ1 873 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 GABRDO14764 452 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 HUS1O60921 280 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 IDEP14735 1019 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 GAP43P17677 238 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 GARTP22102 1010 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 LMO2P25791 158 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 DDX6P26196 483 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 RAP1GAPP47736 663 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 ZXDBP98169 803 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 ZNF268Q14587 947 aaPredicted RBP15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 LIMS2Q7Z4I7 341 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 LRRC52Q8N7C0 313 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 OR5B17Q8NGF7 314 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 TRMT2BQ96GJ1 504 aaKnown RBP15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 MTMR12Q9C0I1 747 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 LINC00597Q9H2U6 94 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 SMOC1Q9H4F8 434 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 GCNT4Q9P109 453 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 ZMYM5Q9UJ78 669 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 EXOC7Q9UPT5 735 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 WNT6Q9Y6F9 365 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 EPG5Q9HCE0 2579 aa15.22■□□□□ 0.03
SMARCAL1-210ENST00000445153 CCDC163A0A0D9SF12 145 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 C2orf78A6NCI8 922 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 TM4SF5O14894 197 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 RPP40O75818 363 aaKnown RBP15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 LDHAP00338 332 aaKnown RBP15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 KRT19P08727 400 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 HOXD13P35453 343 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 RPL10AP62906 217 aaKnown RBP15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 MTF1Q14872 753 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 ZNF77Q15935 545 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 FAM171BQ6P995 826 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 SCN4BQ8IWT1 228 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 ARL14EPQ8N8R7 260 aaPredicted RBP15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 TTC16Q8NEE8 873 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 NOC3LQ8WTT2 800 aaKnown RBP15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 CACTINQ8WUQ7 758 aaKnown RBP15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 KBTBD7Q8WVZ9 684 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 HPS3Q969F9 1004 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 P2RY13Q9BPV8 354 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 ECT2Q9H8V3 914 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 KIF9Q9HAQ2 790 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 TRPC7Q9HCX4 862 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 ABCB6Q9NP58 842 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 PANK4Q9NVE7 773 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 ITGA11Q9UKX5 1188 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 SLC8A2Q9UPR5 921 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 PCDHB13Q9Y5F0 798 aa15.21■□□□□ 0.03
SMARCAL1-210ENST00000445153 ACACBO00763 2458 aa15.21■□□□□ 0.02
SMARCAL1-210ENST00000445153 EML5Q05BV3 1969 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 ZNF638Q14966 1978 aaKnown RBP15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 EPN2O95208 641 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 ZNF806P0C7X5 589 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 RBP5P82980 135 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 MYL7Q01449 175 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 FAM160A1Q05DH4 1040 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 PDGFRLQ15198 375 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 CFAP221Q4G0U5 840 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 CC2D1AQ6P1N0 951 aaPredicted RBP15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 CACNA2D4Q7Z3S7 1137 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 ADGRF2Q8IZF7 708 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 SYCP3Q8IZU3 236 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 TMEM86AQ8N2M4 240 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 TOP6BLQ8N6T0 577 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 OSCP1Q8WVF1 389 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 HHIPQ96QV1 700 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 CRTAC1Q9NQ79 661 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 INTS13Q9NVM9 706 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 DUS2Q9NX74 493 aaKnown RBP15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 NME7Q9Y5B8 376 aa15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 KMT2BQ9UMN6 2715 aaPredicted RBP15.2■□□□□ 0.02
SMARCAL1-210ENST00000445153 CACNA1BQ00975 2339 aa15.19■□□□□ 0.02
SMARCAL1-210ENST00000445153 K7ELQ4 463 aaPredicted RBP15.19■□□□□ 0.02
SMARCAL1-210ENST00000445153 DCLK1O15075 740 aa15.19■□□□□ 0.02
SMARCAL1-210ENST00000445153 ATG13O75143 517 aa15.19■□□□□ 0.02
SMARCAL1-210ENST00000445153 CCDC192P0DO97 292 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms