RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 NEUROG2Q9H2A3 272 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 SLC38A7Q9NVC3 462 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 ADAM21Q9UKJ8 722 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 KPNA7A9QM74 516 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 F8VP50 259 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 ADAMTS4O75173 837 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 RNF8O76064 485 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 RFC1P35251 1148 aaPredicted RBP16.52■□□□□ 0.24
SNX13-204ENST00000444712 OGDHQ02218 1023 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 CACNB2Q08289 660 aaPredicted RBP16.52■□□□□ 0.24
SNX13-204ENST00000444712 CALCOCO2Q13137 446 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 GOLGA7BQ2TAP0 167 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 FAM47CQ5HY64 1035 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 GDF6Q6KF10 455 aaPredicted RBP16.52■□□□□ 0.24
SNX13-204ENST00000444712 CYP4F22Q6NT55 531 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 TMC3Q7Z5M5 1100 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 ZDHHC17Q8IUH5 632 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 PCSK9Q8NBP7 692 aaKnown RBP16.52■□□□□ 0.24
SNX13-204ENST00000444712 SMG8Q8ND04 991 aaKnown RBP16.52■□□□□ 0.24
SNX13-204ENST00000444712 OR6B3Q8NGW1 331 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 STK32AQ8WU08 396 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 ZIC5Q96T25 663 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 NCAPGQ9BPX3 1015 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 ZDHHC18Q9NUE0 388 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 ASNSD1Q9NWL6 643 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 EFR3BQ9Y2G0 817 aa16.52■□□□□ 0.24
SNX13-204ENST00000444712 GOLGA6L10A6NI86 522 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 GPR182O15218 404 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 HOXD10P28358 340 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 LRPAP1P30533 357 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 SP3Q02447 781 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 PTK6Q13882 451 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 TFDP3Q5H9I0 405 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 FAM102AQ5T9C2 384 aaPredicted RBP16.52■□□□□ 0.23
SNX13-204ENST00000444712 DAB2IPQ5VWQ8 1189 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 APPL2Q8NEU8 664 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 C1orf54Q8WWF1 131 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 TSPYL1Q9H0U9 437 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 SNX25Q9H3E2 840 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 CYLDQ9NQC7 956 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 KLK14Q9P0G3 267 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 WHRNQ9P202 907 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 SNX24Q9Y343 169 aa16.52■□□□□ 0.23
SNX13-204ENST00000444712 GOLGA6CA6NDK9 693 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 A8MXQ7 604 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 PPEF2O14830 753 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 HUS1O60921 280 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 PPFIA2O75334 1257 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 GOLGA6DP0CG33 693 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 HSD17B3P37058 310 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 CAV1Q03135 178 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 KRT17Q04695 432 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 SOWAHAQ2M3V2 549 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 PPP1R26Q5T8A7 1209 aaPredicted RBP16.51■□□□□ 0.23
SNX13-204ENST00000444712 DRICH1Q6PGQ1 229 aaPredicted RBP16.51■□□□□ 0.23
SNX13-204ENST00000444712 SPOCD1Q6ZMY3 1216 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 ACOT1Q86TX2 421 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 BBOF1Q8ND07 529 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 UBA3Q8TBC4 463 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 CCHCR1Q8TD31 782 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 RNF25Q96BH1 459 aaPredicted RBP16.51■□□□□ 0.23
SNX13-204ENST00000444712 TNIP3Q96KP6 325 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 FRMD8P1Q9BZ68 369 aaPredicted RBP16.51■□□□□ 0.23
SNX13-204ENST00000444712 SENP6Q9GZR1 1112 aaPredicted RBP16.51■□□□□ 0.23
SNX13-204ENST00000444712 CXCL16Q9H2A7 254 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 GOLGA6AQ9NYA3 693 aa16.51■□□□□ 0.23
SNX13-204ENST00000444712 RPL21P46778 160 aaKnown RBP16.5■□□□□ 0.23
SNX13-204ENST00000444712 PLTPP55058 493 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 DHX9Q08211 1270 aaKnown RBP16.5■□□□□ 0.23
SNX13-204ENST00000444712 SLMAPQ14BN4 828 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 PKDCCQ504Y2 493 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 CRYBG2Q8N1P7 616 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 TOP6BLQ8N6T0 577 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 KLHDC9Q8NEP7 349 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 JOSD2Q8TAC2 188 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 UBLCP1Q8WVY7 318 aaPredicted RBP16.5■□□□□ 0.23
SNX13-204ENST00000444712 FAM204AQ9H8W3 233 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 CHST7Q9NS84 486 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 FAM105AQ9NUU6 356 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 GRHL1Q9NZI5 618 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 ST3GAL5Q9UNP4 418 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 PLAAQ9Y263 795 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 PTPN22Q9Y2R2 807 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 NDC80O14777 642 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 LRCH4O75427 683 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 CABYRO75952 493 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 ASGR1P07306 291 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 ITIH2P19823 946 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 GPD1P21695 349 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 PCK1P35558 622 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 GNL1P36915 607 aaPredicted RBP16.5■□□□□ 0.23
SNX13-204ENST00000444712 KCNJ1P48048 391 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 ZNF143P52747 638 aaPredicted RBP16.5■□□□□ 0.23
SNX13-204ENST00000444712 EIF3BP55884 814 aaKnown RBP16.5■□□□□ 0.23
SNX13-204ENST00000444712 SLC25A11Q02978 314 aaKnown RBP16.5■□□□□ 0.23
SNX13-204ENST00000444712 OR6B2Q6IFH4 312 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 LIMS2Q7Z4I7 341 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 CCDC89Q8N998 374 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 FAM76AQ8TAV0 307 aa16.5■□□□□ 0.23
SNX13-204ENST00000444712 ART4Q93070 314 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms