RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 EFNA5P52803 228 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 SEPT7Q16181 437 aaKnown RBP17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 HADHQ16836 314 aaKnown RBP17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 PARP6Q2NL67 630 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 SMTNL2Q2TAL5 461 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 SAMD7Q7Z3H4 446 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 DNERQ8NFT8 737 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 RSAD2Q8WXG1 361 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 TFAP2BQ92481 460 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 FRMD8P1Q9BZ68 369 aaPredicted RBP17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 RABGEF1Q9UJ41 708 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 DOCK1Q14185 1865 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 FAM189A1O60320 539 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 SSTR1P30872 391 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 TFDP1Q14186 410 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 SURF1Q15526 300 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 C11orf91Q3C1V1 193 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 SCARA5Q6ZMJ2 495 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 CATSPERGQ6ZRH7 1159 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 C3orf62Q6ZUJ4 267 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 PRPF31Q8WWY3 499 aaKnown RBP17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 CPT1BQ92523 772 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 MAF1Q9H063 256 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 SNCAIPQ9Y6H5 919 aa17.33■□□□□ 0.36
SEMA3B-207ENST00000441915 C3orf70A6NLC5 250 aaPredicted RBP17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 MSCO60682 206 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 ATP2A2P16615 1042 aaKnown RBP17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 GDF10P55107 478 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 SLC25A11Q02978 314 aaKnown RBP17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 TARBP2Q15633 366 aaKnown RBP17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 KLHL38Q2WGJ6 581 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 ZNF699Q32M78 642 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 KCNT1Q5JUK3 1230 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 RHPN2Q8IUC4 686 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 HOXC10Q9NYD6 342 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 HAO1Q9UJM8 370 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 CLUHO75153 1309 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 OGTO15294 1046 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 DIAPH2O60879 1101 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 LRCH4O75427 683 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 PSMC4P43686 418 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 RASSF2P50749 326 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 STAT5BP51692 787 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 TFAMQ00059 246 aaKnown RBP17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 ZC3H12AQ5D1E8 599 aaKnown RBP17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 FYB2Q5VWT5 728 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 AGGF1Q8N302 714 aaeCLIP17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 NAT8LQ8N9F0 302 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 C10orf82Q8WW14 230 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 ZNF75CPQ92670 426 aaPredicted RBP17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 INPP5DQ92835 1189 aa17.32■□□□□ 0.36
SEMA3B-207ENST00000441915 SIGLEC16A6NMB1 481 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 MAFO75444 373 aaPredicted RBP17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 WFS1O76024 890 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 SLC8A3P57103 927 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 FNBP1LQ5T0N5 605 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 ANKRD22Q5VYY1 191 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 ADGRD1Q6QNK2 874 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 BBS12Q6ZW61 710 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 PALM2Q8IXS6 379 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 UTP4Q969X6 686 aaKnown RBP17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 TMEM237Q96Q45 408 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 PAFAH2Q99487 392 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 ACSS3Q9H6R3 686 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 ZNF112Q9UJU3 913 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 CD19P15391 556 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 RPS12P25398 132 aaKnown RBP17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 YWHAEP62258 255 aaKnown RBP17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 GAD2Q05329 585 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 FSTL1Q12841 308 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 PTPN20Q4JDL3 420 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 OTOAQ7RTW8 1153 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 THNSL1Q8IYQ7 743 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 RNF217Q8TC41 542 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 FNIP1Q8TF40 1166 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 PCYT2Q99447 389 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 PDGFDQ9GZP0 370 aaPredicted RBP17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 C10orf88Q9H8K7 445 aa17.31■□□□□ 0.36
SEMA3B-207ENST00000441915 UBA1P22314 1058 aaKnown RBP17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 KDELR1P24390 212 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 IL1R2P27930 398 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 CNTN2Q02246 1040 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 MSS51Q4VC12 460 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 FAM160B1Q5W0V3 765 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 MICALL2Q8IY33 904 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 PDIK1LQ8N165 341 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 FBXO36Q8NEA4 188 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 ACO2Q99798 780 aaKnown RBP17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 TRIM6Q9C030 488 aaPredicted RBP17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 SLC24A3Q9HC58 644 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 CPSF3Q9UKF6 684 aaKnown RBP17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 SPDYE16A6NNV3 312 aaPredicted RBP17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 E7ESA3 106 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 SMAPO00193 183 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 FARP2O94887 1054 aaPredicted RBP17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 SRGAP2CP0DJJ0 459 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 RPL22P35268 128 aaKnown RBP17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 ASPAP45381 313 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 IRX1P78414 480 aaPredicted RBP17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 NAA25Q14CX7 972 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms