RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 ISM2Q6H9L7 571 aa19.48■□□□□ 0.71
SMPD4-210ENST00000441135 LRRTM3Q86VH5 581 aa19.48■□□□□ 0.71
SMPD4-210ENST00000441135 FAM200AQ8TCP9 573 aa19.48■□□□□ 0.71
SMPD4-210ENST00000441135 NELFBQ8WX92 580 aa19.48■□□□□ 0.71
SMPD4-210ENST00000441135 TRMT61BQ9BVS5 477 aaKnown RBP19.48■□□□□ 0.71
SMPD4-210ENST00000441135 METTL14Q9HCE5 456 aaKnown RBP19.48■□□□□ 0.71
SMPD4-210ENST00000441135 TMEM8AQ9HCN3 771 aa19.48■□□□□ 0.71
SMPD4-210ENST00000441135 ABI2Q9NYB9 513 aaPredicted RBP19.48■□□□□ 0.71
SMPD4-210ENST00000441135 PCDHB5Q9Y5E4 795 aa19.48■□□□□ 0.71
SMPD4-210ENST00000441135 TRIM49BA6NDI0 452 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 VNN1O95497 513 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 HAPLN1P10915 354 aaPredicted RBP19.47■□□□□ 0.71
SMPD4-210ENST00000441135 PSMC3P17980 439 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 ATF6P18850 670 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 TNNC1P63316 161 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 ANGPT1Q15389 498 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 SGSM1Q2NKQ1 1148 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 ZNF699Q32M78 642 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 WDR72Q3MJ13 1102 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 ARHGAP15Q53QZ3 475 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 INTS6LQ5JSJ4 861 aaKnown RBP19.47■□□□□ 0.71
SMPD4-210ENST00000441135 FILIP1Q7Z7B0 1213 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 MLKLQ8NB16 471 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 KBTBD7Q8WVZ9 684 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 IRF7Q92985 503 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 FAXDC2Q96IV6 333 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 OSBPL6Q9BZF3 934 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 FOXQ1Q9C009 403 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 BRD9Q9H8M2 597 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 ABCB6Q9NP58 842 aa19.47■□□□□ 0.71
SMPD4-210ENST00000441135 DDX43Q9NXZ2 648 aaKnown RBP19.47■□□□□ 0.71
SMPD4-210ENST00000441135 PROB1E7EW31 1015 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 MBD3O95983 291 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 ASS1P00966 412 aaKnown RBP19.46■□□□□ 0.71
SMPD4-210ENST00000441135 TRIM49P0CI25 452 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 TRIM49CP0CI26 452 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 P4HA1P13674 534 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 GABRR2P28476 465 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 CDC25CP30307 473 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 NBL1P41271 181 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 PPP3CAQ08209 521 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 GRM2Q14416 872 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 TAF12Q16514 161 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 ZNF667Q5HYK9 610 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 KRT39Q6A163 491 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 KLHL10Q6JEL2 608 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 VITQ6UXI7 678 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 GAREM2Q75VX8 874 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 FRMD5Q7Z6J6 570 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 GCNAQ96QF7 691 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 PKMYT1Q99640 499 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 DUSP9Q99956 384 aaKnown RBP19.46■□□□□ 0.71
SMPD4-210ENST00000441135 LPIN3Q9BQK8 851 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 ATXN3LQ9H3M9 355 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 ZNF334Q9HCZ1 680 aaPredicted RBP19.46■□□□□ 0.71
SMPD4-210ENST00000441135 TRPV5Q9NQA5 729 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 DLGAP2Q9P1A6 1054 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 ARMCX3Q9UH62 379 aaPredicted RBP19.46■□□□□ 0.71
SMPD4-210ENST00000441135 CDH9Q9ULB4 789 aa19.46■□□□□ 0.71
SMPD4-210ENST00000441135 GNA14O95837 355 aa19.45■□□□□ 0.7
SMPD4-210ENST00000441135 HLA-DRAP01903 254 aa19.45■□□□□ 0.7
SMPD4-210ENST00000441135 DCNP07585 359 aaKnown RBP19.45■□□□□ 0.7
SMPD4-210ENST00000441135 VIPR2P41587 438 aa19.45■□□□□ 0.7
SMPD4-210ENST00000441135 MAPRE1Q15691 268 aaKnown RBP19.45■□□□□ 0.7
SMPD4-210ENST00000441135 TPRG1Q6ZUI0 275 aa19.45■□□□□ 0.7
SMPD4-210ENST00000441135 OSTM1Q86WC4 334 aa19.45■□□□□ 0.7
SMPD4-210ENST00000441135 FUBP3Q96I24 572 aaKnown RBP eCLIP19.45■□□□□ 0.7
SMPD4-210ENST00000441135 MMS19Q96T76 1030 aa19.45■□□□□ 0.7
SMPD4-210ENST00000441135 NELL2Q99435 816 aa19.45■□□□□ 0.7
SMPD4-210ENST00000441135 IMPG2Q9BZV3 1241 aa19.45■□□□□ 0.7
SMPD4-210ENST00000441135 LTB4R2Q9NPC1 389 aa19.45■□□□□ 0.7
SMPD4-210ENST00000441135 RWDD2AQ9UIY3 292 aa19.45■□□□□ 0.7
SMPD4-210ENST00000441135 ZMYM5Q9UJ78 669 aa19.45■□□□□ 0.7
SMPD4-210ENST00000441135 CTNND2Q9UQB3 1225 aa19.45■□□□□ 0.7
SMPD4-210ENST00000441135 MRPS17Q9Y2R5 130 aaKnown RBP19.45■□□□□ 0.7
SMPD4-210ENST00000441135 PMM2O15305 246 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 FGFR1OPO95684 399 aaKnown RBP19.44■□□□□ 0.7
SMPD4-210ENST00000441135 GDI1P31150 447 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 PIK3CAP42336 1068 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 MAGEA9P43362 315 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 GCLMP48507 274 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 MXI1P50539 228 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 MARSP56192 900 aaKnown RBP19.44■□□□□ 0.7
SMPD4-210ENST00000441135 RPL10AP62906 217 aaKnown RBP19.44■□□□□ 0.7
SMPD4-210ENST00000441135 UBXN2BQ14CS0 331 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 CT47A1Q5JQC4 288 aaPredicted RBP19.44■□□□□ 0.7
SMPD4-210ENST00000441135 GPR158Q5T848 1215 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 FAM171BQ6P995 826 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 ZNF852Q6ZMS4 543 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 RBM43Q6ZSC3 357 aaKnown RBP19.44■□□□□ 0.7
SMPD4-210ENST00000441135 MFSD6LQ8IWD5 586 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 GPT2Q8TD30 523 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 EEF2KMTQ96G04 330 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 BCO2Q9BYV7 579 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 TMLHEQ9NVH6 421 aa19.44■□□□□ 0.7
SMPD4-210ENST00000441135 HEPACAM2A8MVW5 462 aa19.43■□□□□ 0.7
SMPD4-210ENST00000441135 MAN2B1O00754 1011 aa19.43■□□□□ 0.7
SMPD4-210ENST00000441135 ZNF263O14978 683 aa19.43■□□□□ 0.7
SMPD4-210ENST00000441135 ACAT1P24752 427 aaKnown RBP19.43■□□□□ 0.7
SMPD4-210ENST00000441135 WEE1P30291 646 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms