RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 MARK2Q7KZI7 788 aaKnown RBP12.49□□□□□ -0.41
LTBR-203ENST00000441074 KAT5Q92993 513 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 PPP2R3CQ969Q6 453 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 FNBP1Q96RU3 617 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 SH2D3AQ9BRG2 576 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 VPS11Q9H270 941 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 ZNF408Q9H9D4 720 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 AFG3L2Q9Y4W6 797 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 CTDP1Q9Y5B0 961 aaPredicted RBP12.49□□□□□ -0.41
LTBR-203ENST00000441074 ARHGEF35A5YM69 484 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 CYP26A1O43174 497 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 TGDSO95455 350 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 ITGBL1O95965 494 aaPredicted RBP12.49□□□□□ -0.41
LTBR-203ENST00000441074 AMPD1P23109 780 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 PIK3CAP42336 1068 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 VAMP7P51809 220 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 SNRPFP62306 86 aaKnown RBP12.49□□□□□ -0.41
LTBR-203ENST00000441074 DLG4P78352 724 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 PTP4A2Q12974 167 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 TTLL12Q14166 644 aaPredicted RBP12.49□□□□□ -0.41
LTBR-203ENST00000441074 TMEM132BQ14DG7 1078 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 P3H1Q32P28 736 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 SUPT20HL1Q3ZLR7 823 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 SNRNP48Q6IEG0 339 aaKnown RBP12.49□□□□□ -0.41
LTBR-203ENST00000441074 ACAD10Q6JQN1 1059 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 NET1Q7Z628 596 aaPredicted RBP12.49□□□□□ -0.41
LTBR-203ENST00000441074 SLC47A2Q86VL8 602 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 NCAPG2Q86XI2 1143 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 ST13P4Q8IZP2 240 aaPredicted RBP12.49□□□□□ -0.41
LTBR-203ENST00000441074 RDH13Q8NBN7 331 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 CDCA5Q96FF9 252 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
LTBR-203ENST00000441074 MANSC1Q9H8J5 431 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 KCNK13Q9HB14 408 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 WRAP73Q9P2S5 460 aaPredicted RBP12.49□□□□□ -0.41
LTBR-203ENST00000441074 TTC36A6NLP5 189 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 TM9SF1O15321 606 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 COQ9O75208 318 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 PABPC4LP0CB38 370 aaKnown RBP12.48□□□□□ -0.41
LTBR-203ENST00000441074 RALAP11233 206 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 MYCLP12524 364 aaPredicted RBP12.48□□□□□ -0.41
LTBR-203ENST00000441074 KRT4P19013 534 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 ADRA1DP25100 572 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 SERPINB3P29508 390 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 PPP3CAQ08209 521 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 SEPT7Q16181 437 aaKnown RBP12.48□□□□□ -0.41
LTBR-203ENST00000441074 CEP55Q53EZ4 464 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 CCDC110Q8TBZ0 833 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 SYTL5Q8TDW5 730 aaPredicted RBP12.48□□□□□ -0.41
LTBR-203ENST00000441074 TEKT3Q9BXF9 490 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 VPS37BQ9H9H4 285 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 DNAAF2Q9NVR5 837 aaKnown RBP12.48□□□□□ -0.41
LTBR-203ENST00000441074 ANAPC7Q9UJX3 599 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 K7ENM7 598 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 DNALI1O14645 258 aaPredicted RBP12.48□□□□□ -0.41
LTBR-203ENST00000441074 ALOX15BO15296 676 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 ZSCAN9O15535 394 aaPredicted RBP12.48□□□□□ -0.41
LTBR-203ENST00000441074 HSD17B4P51659 736 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 MRPS9P82933 396 aaKnown RBP12.48□□□□□ -0.41
LTBR-203ENST00000441074 BAATQ14032 418 aaPredicted RBP12.48□□□□□ -0.41
LTBR-203ENST00000441074 HNRNPDQ14103 355 aaKnown RBP12.48□□□□□ -0.41
LTBR-203ENST00000441074 MYLK4Q86YV6 388 aaPredicted RBP12.48□□□□□ -0.41
LTBR-203ENST00000441074 NME8Q8N427 588 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 SHC3Q92529 594 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 KREMEN1Q96MU8 473 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 ACCSQ96QU6 501 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 TMEM120AQ9BXJ8 343 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 HEMGNQ9BXL5 484 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 PREBQ9HCU5 417 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 G3BP2Q9UN86 482 aaKnown RBP12.48□□□□□ -0.41
LTBR-203ENST00000441074 TELO2Q9Y4R8 837 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 PPP2R3BQ9Y5P8 575 aa12.48□□□□□ -0.41
LTBR-203ENST00000441074 WDR91A4D1P6 747 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 PIM1P11309 404 aaPredicted RBP12.47□□□□□ -0.41
LTBR-203ENST00000441074 CYP11B1P15538 503 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 MAGEA8P43361 318 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 GCLMP48507 274 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 AP2B1P63010 937 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 TRMT5Q32P41 509 aaKnown RBP12.47□□□□□ -0.41
LTBR-203ENST00000441074 EFHC2Q5JST6 749 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 GSTA5Q7RTV2 222 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 TMPRSS6Q8IU80 811 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 MIPOL1Q8TD10 442 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 NAT14Q8WUY8 206 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 PRR11Q96HE9 360 aaPredicted RBP12.47□□□□□ -0.41
LTBR-203ENST00000441074 HIC2Q96JB3 615 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 FAM161BQ96MY7 647 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 ZNF577Q9BSK1 485 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 TSSK1BQ9BXA7 367 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 ACP6Q9NPH0 428 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 FBXO6Q9NRD1 293 aaPredicted RBP12.47□□□□□ -0.41
LTBR-203ENST00000441074 KCNH7Q9NS40 1196 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 NDE1Q9NXR1 346 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 GALNT8Q9NY28 637 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 FETUBQ9UGM5 382 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 GMEB1Q9Y692 573 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 MYH11P35749 1972 aa12.47□□□□□ -0.41
LTBR-203ENST00000441074 SETSIPP0DME0 302 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 FDX1P10109 184 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms