RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 FNDC1Q4ZHG4 1894 aaPredicted RBP20.18■□□□□ 0.82
SNX17-203ENST00000440760 CLDN5O00501 218 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 SPOPO43791 374 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 ODC1P11926 461 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 RNASE9P60153 205 aaKnown RBP20.17■□□□□ 0.82
SNX17-203ENST00000440760 PDE4CQ08493 712 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 STILQ15468 1287 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 ERCC6LQ2NKX8 1250 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 MDH1BQ5I0G3 518 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 TEX35Q5T0J7 233 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 DCAF12L1Q5VU92 463 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.17■□□□□ 0.824e-9■■■■■ 37.8
SNX17-203ENST00000440760 XYLT1Q86Y38 959 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 RSPH1Q8WYR4 309 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 C18orf8Q96DM3 657 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 TNIP3Q96KP6 325 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 CASD1Q96PB1 797 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 TMEM106CQ9BVX2 250 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 MRPL47Q9HD33 250 aaKnown RBP20.17■□□□□ 0.82
SNX17-203ENST00000440760 CRTAC1Q9NQ79 661 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 E5RJQ4 531 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 ELF2Q15723 593 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 PMF1Q6P1K2 205 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 C3orf20Q8ND61 904 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 FEZF2Q8TBJ5 459 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 ALG3Q92685 438 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 PIWIL1Q96J94 861 aaKnown RBP20.17■□□□□ 0.82
SNX17-203ENST00000440760 RTP3Q9BQQ7 232 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 SYT15Q9BQS2 421 aa20.17■□□□□ 0.82
SNX17-203ENST00000440760 CTAGE15A4D2H0 777 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 TRIM43BA6NCK2 446 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 CTAGE8P0CG41 777 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 PTPN1P18031 435 aaKnown RBP20.16■□□□□ 0.82
SNX17-203ENST00000440760 BCAR1P56945 870 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 OGDHQ02218 1023 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 ZNF252P-AS1Q0IIN9 211 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 PPP1R15BQ5SWA1 713 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 CCDC181Q5TID7 509 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 DCLRE1AQ6PJP8 1040 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 NECAB2Q7Z6G3 386 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 CTAGE6Q86UF2 777 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 CTAGE4Q8IX94 777 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 FUKQ8N0W3 1084 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 CRIPAKQ8N1N5 446 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 TMEM86AQ8N2M4 240 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 NOA1Q8NC60 698 aaKnown RBP20.16■□□□□ 0.82
SNX17-203ENST00000440760 TRIM43Q96BQ3 446 aaPredicted RBP20.16■□□□□ 0.82
SNX17-203ENST00000440760 CALR3Q96L12 384 aaKnown RBP20.16■□□□□ 0.82
SNX17-203ENST00000440760 FAM193BQ96PV7 902 aaPredicted RBP20.16■□□□□ 0.82
SNX17-203ENST00000440760 METTL5Q9NRN9 209 aaKnown RBP20.16■□□□□ 0.82
SNX17-203ENST00000440760 STRIP2Q9ULQ0 834 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 LTBP2Q14767 1821 aa20.16■□□□□ 0.82
SNX17-203ENST00000440760 MYO1FO00160 1098 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 UPP2O95045 317 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 CKAP4Q07065 602 aaKnown RBP20.15■□□□□ 0.82
SNX17-203ENST00000440760 C2orf54Q08AI8 447 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 JOSD2Q8TAC2 188 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 IPO4Q8TEX9 1081 aaKnown RBP20.15■□□□□ 0.82
SNX17-203ENST00000440760 CD101Q93033 1021 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 EPC1Q9H2F5 836 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 M0QZQ0 153 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 PARNO95453 639 aaKnown RBP20.15■□□□□ 0.82
SNX17-203ENST00000440760 PBX3P40426 434 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 LHX1P48742 406 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 BCAT1P54687 386 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 ZNF211Q13398 564 aaPredicted RBP20.15■□□□□ 0.82
SNX17-203ENST00000440760 DCUN1D2Q6PH85 259 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 FAM183BPQ6ZVS7 135 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 NPAS4Q8IUM7 802 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 MSANTD4Q8NCY6 345 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 SLC35F5Q8WV83 523 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 SUSD3Q96L08 255 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 SELENOOQ9BVL4 669 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 NRDE2Q9H7Z3 1164 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 RNF216Q9NWF9 866 aaPredicted RBP20.15■□□□□ 0.82
SNX17-203ENST00000440760 KANSL3Q9P2N6 904 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 USTQ9Y2C2 406 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 VWA8A3KMH1 1905 aa20.15■□□□□ 0.82
SNX17-203ENST00000440760 MYBPHLA2RUH7 354 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 TMEM191CA6NGB0 347 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 TBKBP1A7MCY6 615 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 EFCAB8A8MWE9 144 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 CEP104O60308 925 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 GABBR2O75899 941 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 PROSCO94903 275 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 GABRB2P47870 512 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 BST2Q10589 180 aaKnown RBP20.14■□□□□ 0.81
SNX17-203ENST00000440760 AADACL2Q6P093 401 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 RSRC2Q7L4I2 434 aaKnown RBP20.14■□□□□ 0.81
SNX17-203ENST00000440760 EMC1Q8N766 993 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 ANKRD52Q8NB46 1076 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 GOLGA1Q92805 767 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 CSF2RAP15509 400 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 RFC1P35251 1148 aaPredicted RBP20.14■□□□□ 0.81
SNX17-203ENST00000440760 RABGGTBP53611 331 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 FAM102AQ5T9C2 384 aaPredicted RBP20.14■□□□□ 0.81
SNX17-203ENST00000440760 CNKSR3Q6P9H4 555 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 PAQR9Q6ZVX9 377 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 TMCO2Q7Z6W1 182 aaPredicted RBP20.14■□□□□ 0.81
SNX17-203ENST00000440760 TMEM209Q96SK2 561 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms