RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 PPP3CAQ08209 521 aa21.39■■□□□ 1.02
FMR1-208ENST00000440235 PIGHQ14442 188 aaPredicted RBP21.39■■□□□ 1.02
FMR1-208ENST00000440235 ARL13BQ3SXY8 428 aa21.39■■□□□ 1.02
FMR1-208ENST00000440235 DNAL1Q4LDG9 190 aa21.39■■□□□ 1.02
FMR1-208ENST00000440235 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.39■■□□□ 1.02
FMR1-208ENST00000440235 MMTAG2Q9BU76 263 aaKnown RBP21.39■■□□□ 1.02
FMR1-208ENST00000440235 XKR3Q5GH77 459 aa21.39■■□□□ 1.01
FMR1-208ENST00000440235 TCHHL1Q5QJ38 904 aaPredicted RBP21.39■■□□□ 1.01
FMR1-208ENST00000440235 SP8Q8IXZ3 490 aa21.39■■□□□ 1.01
FMR1-208ENST00000440235 SPATA17Q96L03 361 aa21.39■■□□□ 1.01
FMR1-208ENST00000440235 DONSONQ9NYP3 566 aa21.39■■□□□ 1.01
FMR1-208ENST00000440235 NR2E1Q9Y466 385 aa21.39■■□□□ 1.01
FMR1-208ENST00000440235 TULP2O00295 520 aa21.39■■□□□ 1.01
FMR1-208ENST00000440235 RAP1GAPP47736 663 aa21.39■■□□□ 1.01
FMR1-208ENST00000440235 CACNA2D1P54289 1103 aa21.39■■□□□ 1.01
FMR1-208ENST00000440235 CAPRIN1Q14444 709 aaKnown RBP21.39■■□□□ 1.01
FMR1-208ENST00000440235 ECM1Q16610 540 aa21.39■■□□□ 1.01
FMR1-208ENST00000440235 THEMIS2Q5TEJ8 643 aa21.39■■□□□ 1.01
FMR1-208ENST00000440235 CDKL3Q8IVW4 592 aaPredicted RBP21.39■■□□□ 1.01
FMR1-208ENST00000440235 CYGBQ8WWM9 190 aa21.39■■□□□ 1.01
FMR1-208ENST00000440235 FAM193BQ96PV7 902 aaPredicted RBP21.39■■□□□ 1.01
FMR1-208ENST00000440235 NEUROG2Q9H2A3 272 aa21.39■■□□□ 1.01
FMR1-208ENST00000440235 DDX18Q9NVP1 670 aaKnown RBP21.39■■□□□ 1.01
FMR1-208ENST00000440235 DNAJC8O75937 253 aaPredicted RBP21.38■■□□□ 1.01
FMR1-208ENST00000440235 GH1P01241 217 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 CUL2Q13617 745 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 AUHQ13825 339 aaKnown RBP21.38■■□□□ 1.01
FMR1-208ENST00000440235 CES3Q6UWW8 571 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 PRELID2Q8N945 189 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 STX18Q9P2W9 335 aaKnown RBP21.38■■□□□ 1.01
FMR1-208ENST00000440235 PKD1L3Q7Z443 1732 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 HAS1Q92839 578 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 CCT7Q99832 543 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 ASCC2Q9H1I8 757 aaPredicted RBP21.38■■□□□ 1.01
FMR1-208ENST00000440235 HACD3Q9P035 362 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 APPL1Q9UKG1 709 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 DNAJC16Q9Y2G8 782 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 ORC6Q9Y5N6 252 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 SIPA1L3O60292 1781 aaPredicted RBP21.38■■□□□ 1.01
FMR1-208ENST00000440235 SMNDC1O75940 238 aaKnown RBP eCLIP21.38■■□□□ 1.01
FMR1-208ENST00000440235 TAC1P20366 129 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 AVPR1AP37288 418 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 SLC51AQ86UW1 340 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 ZBTB46Q86UZ6 589 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 OTUD5Q96G74 571 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 ADRA2BP18089 450 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 TFE3P19532 575 aaPredicted RBP21.38■■□□□ 1.01
FMR1-208ENST00000440235 DCAF6Q58WW2 860 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 SPATA20Q8TB22 786 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 PTPRHQ9HD43 1115 aa21.38■■□□□ 1.01
FMR1-208ENST00000440235 AP1G2O75843 785 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 CHKAP35790 457 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 GNL1P36915 607 aaPredicted RBP21.37■■□□□ 1.01
FMR1-208ENST00000440235 KPNA2P52292 529 aaKnown RBP21.37■■□□□ 1.01
FMR1-208ENST00000440235 FLOT2Q14254 428 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 SCUBE1Q8IWY4 988 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 LNX1Q8TBB1 728 aaPredicted RBP21.37■■□□□ 1.01
FMR1-208ENST00000440235 ZNF384Q8TF68 577 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 USP13Q92995 863 aaPredicted RBP21.37■■□□□ 1.01
FMR1-208ENST00000440235 ERVK-5Q9HDB9 667 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 UBP1Q9NZI7 540 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 RPS6KL1Q9Y6S9 549 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 KIAA0391O15091 583 aaKnown RBP21.37■■□□□ 1.01
FMR1-208ENST00000440235 SLITRK3O94933 977 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 HADHAP40939 763 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 KPNB1Q14974 876 aaKnown RBP21.37■■□□□ 1.01
FMR1-208ENST00000440235 EFHC2Q5JST6 749 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 BTNL9Q6UXG8 535 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 DNAJC19Q96DA6 116 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 NRBF2Q96F24 287 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 WDR70Q9NW82 654 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 KRT16P08779 473 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 ELK3P41970 407 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 PHKA2P46019 1235 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 COPAP53621 1224 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 ERMARDQ5T6L9 678 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 C12orf65Q9H3J6 166 aaKnown RBP21.37■■□□□ 1.01
FMR1-208ENST00000440235 LAMB4A4D0S4 1761 aa21.37■■□□□ 1.01
FMR1-208ENST00000440235 DISP2A7MBM2 1401 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 FCHO1O14526 889 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 DRD4P21917 467 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 KCNA4P22459 653 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 CNGA2Q16280 664 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 ZBTB45Q96K62 511 aaPredicted RBP21.36■■□□□ 1.01
FMR1-208ENST00000440235 ACAD9Q9H845 621 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 CYP4F12Q9HCS2 524 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 GFAPP14136 432 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 RPA3P35244 121 aaPredicted RBP21.36■■□□□ 1.01
FMR1-208ENST00000440235 TTC8Q8TAM2 541 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 DIS3LQ8TF46 1054 aaKnown RBP21.36■■□□□ 1.01
FMR1-208ENST00000440235 MIEF2Q96C03 454 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 WHRNQ9P202 907 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 HERC5Q9UII4 1024 aaKnown RBP21.36■■□□□ 1.01
FMR1-208ENST00000440235 ASAP2O43150 1006 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 MYL6P60660 151 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 CENPCQ03188 943 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 DENND5BQ6ZUT9 1274 aa21.36■■□□□ 1.01
FMR1-208ENST00000440235 PROSCO94903 275 aa21.35■■□□□ 1.01
FMR1-208ENST00000440235 EXOC3L1Q86VI1 746 aa21.35■■□□□ 1.01
FMR1-208ENST00000440235 RIT2Q99578 217 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms