RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 TMEM119Q4V9L6 283 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 HEATR6Q6AI08 1181 aaKnown RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 NEK5Q6P3R8 708 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 CERKQ8TCT0 537 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 SH3TC2Q8TF17 1288 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 ATP8B4Q8TF62 1192 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 ATG4AQ8WYN0 398 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 SRPK1Q96SB4 655 aaKnown RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 RUSC1Q9BVN2 902 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 MRPL46Q9H2W6 279 aaKnown RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 RIOX1Q9H6W3 641 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 NGRNQ9NPE2 291 aaKnown RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 AGPAT3Q9NRZ7 376 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 KLHL8Q9P2G9 620 aaPredicted RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 DAGLAQ9Y4D2 1042 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 MST1RQ04912 1400 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 PIK3C2AO00443 1686 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 GRIN2DO15399 1336 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 HOXA2O43364 376 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 APBA3O96018 575 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 APOA4P06727 396 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 MUTP22033 750 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 HSPA13P48723 471 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 CLK1P49759 484 aaKnown RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 EPHB1P54762 984 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 BCAR1P56945 870 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 CENPCQ03188 943 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 C4orf46Q504U0 113 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 EFL1Q7Z2Z2 1120 aaKnown RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 SLC15A3Q8IY34 581 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 PBXIP1Q96AQ6 731 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 MAGEB18Q96M61 343 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 ZNF560Q96MR9 790 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 MTMR9Q96QG7 549 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 FAM213AQ9BRX8 229 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 MRPL4Q9BYD3 311 aaKnown RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 OSBPL8Q9BZF1 889 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 TMEM117Q9H0C3 514 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 NRDE2Q9H7Z3 1164 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 ATAD3AQ9NVI7 634 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 HSPBP1Q9NZL4 362 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 TEKT2Q9UIF3 430 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 PHTF1Q9UMS5 762 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 TRAF3IP3Q9Y228 551 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 GPR75-ASB3A0A0A6YYF3 556 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 DENND3A2RUS2 1198 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 GTPBP10A4D1E9 387 aaKnown RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 WTIPA6NIX2 430 aaPredicted RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 KCNQ2O43526 872 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 LCA5LO95447 670 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 INHBCP55103 352 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 MTTPP55157 894 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 EVX2Q03828 476 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 MED21Q13503 144 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 ITPK1Q13572 414 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 HIF1AQ16665 826 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 HGSNATQ68CP4 663 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 XRRA1Q6P2D8 792 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 INTS5Q6P9B9 1019 aaKnown RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 TXNRD3Q86VQ6 643 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 ANKK1Q8NFD2 765 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 AGAP11Q8TF27 550 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 CPA5Q8WXQ8 436 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 SLC35C1Q96A29 364 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 MASTLQ96GX5 879 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 NDNQ99608 321 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 KLHL11Q9NVR0 708 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 GTF3C4Q9UKN8 822 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 PCP4L1A6NKN8 68 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 TTLL13PA6NNM8 815 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 SPTLC1O15269 473 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 ARHGEF9O43307 516 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 MTSS1O43312 755 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 TLR2O60603 784 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 SNX2O60749 519 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 KITP10721 976 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 EIF2AK2P19525 551 aaKnown RBP6.63□□□□□ -1.35
BDNF-211ENST00000439476 KCNA3P22001 575 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 TCF7P36402 384 aaPredicted RBP6.63□□□□□ -1.35
BDNF-211ENST00000439476 PSMC6P62333 389 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 HIC1Q14526 733 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 INPP5AQ14642 412 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 TKFCQ3LXA3 575 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 CEP55Q53EZ4 464 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 EFHC2Q5JST6 749 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 SPDYCQ5MJ68 293 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 LVRNQ6Q4G3 990 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 BPHLQ86WA6 291 aaPredicted RBP6.63□□□□□ -1.35
BDNF-211ENST00000439476 GPD1LQ8N335 351 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 SKA2Q8WVK7 121 aaPredicted RBP6.63□□□□□ -1.35
BDNF-211ENST00000439476 ATXN2LQ8WWM7 1075 aaKnown RBP6.63□□□□□ -1.35
BDNF-211ENST00000439476 APBB2Q92870 758 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 GLMNQ92990 594 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 TSPAN17Q96FV3 270 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 SH2D3AQ9BRG2 576 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 SMYD3Q9H7B4 428 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 WHRNQ9P202 907 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 MTO1Q9Y2Z2 717 aaKnown RBP6.63□□□□□ -1.35
BDNF-211ENST00000439476 FMN2Q9NZ56 1722 aa6.63□□□□□ -1.35
BDNF-211ENST00000439476 SYCE1LA8MT33 242 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms