RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 LENG9Q96B70 501 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 MAML3Q96JK9 1138 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 TUBB6Q9BUF5 446 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 SAYSD1Q9NPB0 183 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 ACP6Q9NPH0 428 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 RNF146Q9NTX7 359 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 SENP1Q9P0U3 644 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 KANSL3Q9P2N6 904 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 DCTN4Q9UJW0 460 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 PCDHA1Q9Y5I3 950 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 UBE4BO95155 1302 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 CFAP69A5D8W1 941 aa9□□□□□ -0.97
HPS4-206ENST00000439453 HAUS5O94927 633 aa9□□□□□ -0.97
HPS4-206ENST00000439453 INHAP05111 366 aa9□□□□□ -0.97
HPS4-206ENST00000439453 UBTFL6P0CB48 400 aaPredicted RBP9□□□□□ -0.97
HPS4-206ENST00000439453 FMO1Q01740 532 aa9□□□□□ -0.97
HPS4-206ENST00000439453 GSTA3Q16772 222 aa9□□□□□ -0.97
HPS4-206ENST00000439453 LVRNQ6Q4G3 990 aa9□□□□□ -0.97
HPS4-206ENST00000439453 C1orf186Q6ZWK4 172 aa9□□□□□ -0.97
HPS4-206ENST00000439453 KBTBD2Q8IY47 623 aa9□□□□□ -0.97
HPS4-206ENST00000439453 VPS52Q8N1B4 723 aa9□□□□□ -0.97
HPS4-206ENST00000439453 CCDC89Q8N998 374 aa9□□□□□ -0.97
HPS4-206ENST00000439453 CHST13Q8NET6 341 aa9□□□□□ -0.97
HPS4-206ENST00000439453 WDR60Q8WVS4 1066 aa9□□□□□ -0.97
HPS4-206ENST00000439453 CRYGNQ8WXF5 182 aa9□□□□□ -0.97
HPS4-206ENST00000439453 AZIN2Q96A70 460 aa9□□□□□ -0.97
HPS4-206ENST00000439453 MCUR1Q96AQ8 359 aa9□□□□□ -0.97
HPS4-206ENST00000439453 NSL1Q96IY1 281 aa9□□□□□ -0.97
HPS4-206ENST00000439453 FAM20AQ96MK3 541 aa9□□□□□ -0.97
HPS4-206ENST00000439453 FIZ1Q96SL8 496 aa9□□□□□ -0.97
HPS4-206ENST00000439453 MMP19Q99542 508 aa9□□□□□ -0.97
HPS4-206ENST00000439453 ZNF184Q99676 751 aaPredicted RBP9□□□□□ -0.97
HPS4-206ENST00000439453 KRT82Q9NSB4 513 aa9□□□□□ -0.97
HPS4-206ENST00000439453 COL20A1Q9P218 1284 aa9□□□□□ -0.97
HPS4-206ENST00000439453 ANKFY1Q9P2R3 1169 aa9□□□□□ -0.97
HPS4-206ENST00000439453 ZNF212Q9UDV6 495 aa9□□□□□ -0.97
HPS4-206ENST00000439453 DYNC1LI1Q9Y6G9 523 aaKnown RBP9□□□□□ -0.97
HPS4-206ENST00000439453 SOWAHBA6NEL2 793 aa9□□□□□ -0.97
HPS4-206ENST00000439453 FAM86B1E9PN63 330 aa9□□□□□ -0.97
HPS4-206ENST00000439453 EML1O00423 815 aa9□□□□□ -0.97
HPS4-206ENST00000439453 CYP26A1O43174 497 aa9□□□□□ -0.97
HPS4-206ENST00000439453 FAM86B2P0C5J1 330 aa9□□□□□ -0.97
HPS4-206ENST00000439453 CNTN2Q02246 1040 aa9□□□□□ -0.97
HPS4-206ENST00000439453 CENPCQ03188 943 aa9□□□□□ -0.97
HPS4-206ENST00000439453 CETN1Q12798 172 aa9□□□□□ -0.97
HPS4-206ENST00000439453 MAPK6Q16659 721 aa9□□□□□ -0.97
HPS4-206ENST00000439453 OLFML2BQ68BL8 750 aa9□□□□□ -0.97
HPS4-206ENST00000439453 CEP128Q6ZU80 1094 aa9□□□□□ -0.97
HPS4-206ENST00000439453 STXBP4Q6ZWJ1 553 aa9□□□□□ -0.97
HPS4-206ENST00000439453 SLC47A2Q86VL8 602 aa9□□□□□ -0.97
HPS4-206ENST00000439453 ARHGAP18Q8N392 663 aa9□□□□□ -0.97
HPS4-206ENST00000439453 ZCCHC9Q8N567 271 aaKnown RBP9□□□□□ -0.97
HPS4-206ENST00000439453 RFWD2Q8NHY2 731 aa9□□□□□ -0.97
HPS4-206ENST00000439453 UBE2OQ9C0C9 1292 aaKnown RBP9□□□□□ -0.97
HPS4-206ENST00000439453 PAK6Q9NQU5 681 aaPredicted RBP9□□□□□ -0.97
HPS4-206ENST00000439453 HOMER2Q9NSB8 354 aa9□□□□□ -0.97
HPS4-206ENST00000439453 VAV3Q9UKW4 847 aa9□□□□□ -0.97
HPS4-206ENST00000439453 CCPG1Q9ULG6 757 aa9□□□□□ -0.97
HPS4-206ENST00000439453 MEIS2O14770 477 aa9□□□□□ -0.97
HPS4-206ENST00000439453 TYROBPO43914 113 aa9□□□□□ -0.97
HPS4-206ENST00000439453 PLS3P13797 630 aa9□□□□□ -0.97
HPS4-206ENST00000439453 HOXD10P28358 340 aa9□□□□□ -0.97
HPS4-206ENST00000439453 RGS2P41220 211 aa9□□□□□ -0.97
HPS4-206ENST00000439453 PPP3CAQ08209 521 aa9□□□□□ -0.97
HPS4-206ENST00000439453 CACNB2Q08289 660 aaPredicted RBP9□□□□□ -0.97
HPS4-206ENST00000439453 AP3B2Q13367 1082 aa9□□□□□ -0.97
HPS4-206ENST00000439453 CNPY1Q3B7I2 92 aa9□□□□□ -0.97
HPS4-206ENST00000439453 TKFCQ3LXA3 575 aa9□□□□□ -0.97
HPS4-206ENST00000439453 WDR72Q3MJ13 1102 aa9□□□□□ -0.97
HPS4-206ENST00000439453 EPC2Q52LR7 807 aa9□□□□□ -0.97
HPS4-206ENST00000439453 PCNX4Q63HM2 1172 aa9□□□□□ -0.97
HPS4-206ENST00000439453 FAM178BQ8IXR5 827 aa9□□□□□ -0.97
HPS4-206ENST00000439453 FAM71AQ8IYT1 594 aa9□□□□□ -0.97
HPS4-206ENST00000439453 RAET1EQ8TD07 263 aa9□□□□□ -0.97
HPS4-206ENST00000439453 NR1H4Q96RI1 486 aaPredicted RBP9□□□□□ -0.97
HPS4-206ENST00000439453 FAM118BQ9BPY3 351 aa9□□□□□ -0.97
HPS4-206ENST00000439453 DDX50Q9BQ39 737 aaKnown RBP9□□□□□ -0.97
HPS4-206ENST00000439453 FOXP3Q9BZS1 431 aa9□□□□□ -0.97
HPS4-206ENST00000439453 A0A1W2PPM1 405 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 PDLIM1O00151 329 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 MSH4O15457 936 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 CETN2P41208 172 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 GCLMP48507 274 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 MNX1P50219 401 aaPredicted RBP8.99□□□□□ -0.97
HPS4-206ENST00000439453 IKQ13123 557 aaPredicted RBP8.99□□□□□ -0.97
HPS4-206ENST00000439453 RASIP1Q5U651 963 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 RINLQ6ZS11 566 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 SDCCAG8Q86SQ7 713 aaPredicted RBP8.99□□□□□ -0.97
HPS4-206ENST00000439453 SYCP3Q8IZU3 236 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 HEMGNQ9BXL5 484 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 ACAD9Q9H845 621 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.99□□□□□ -0.972e-6■■■■■ 76
HPS4-206ENST00000439453 DDX43Q9NXZ2 648 aaKnown RBP8.99□□□□□ -0.97
HPS4-206ENST00000439453 HEY2Q9UBP5 337 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 MYH11P35749 1972 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 ADCY6O43306 1168 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 CREB3O43889 395 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 LYNP07948 512 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 CYBAP13498 195 aa8.99□□□□□ -0.97
HPS4-206ENST00000439453 OVGP1Q12889 678 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms