RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 RPRD2Q5VT52 1461 aaKnown RBP3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 COL22A1Q8NFW1 1626 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 KRTAP29-1A8MX34 341 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 E7ENX8 843 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 GCOM1H8Y6P7 765 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 PRKCGP05129 697 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 CD1AP06126 327 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 CELA2AP08217 269 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 ITGB6P18564 788 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 SLC16A1P53985 500 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 NXPH1P58417 271 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 POU6F2P78424 691 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 TAP2Q03519 686 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 RAB39AQ14964 217 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 FAM153CQ494X1 144 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 FCRLBQ6BAA4 426 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 TAPT1Q6NXT6 567 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 PGM2L1Q6PCE3 622 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 TMPRSS9Q7Z410 1059 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 CNTD1Q8N815 330 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 PDPRQ8NCN5 879 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 JADE3Q92613 823 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 MRGPRX4Q96LA9 322 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 HAPLN3Q96S86 360 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 KLC4Q9NSK0 619 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 MKS1Q9NXB0 559 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 ADAM21Q9UKJ8 722 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 ST3GAL5Q9UNP4 418 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 TNRC6CQ9HCJ0 1690 aaKnown RBP3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 AOX1Q06278 1338 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 DOPEY1Q5JWR5 2465 aa3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P18-201ENST00000438801 NEXMIFQ5QGS0 1516 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 WDR27A2RRH5 827 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 WDR91A4D1P6 747 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 VWC2LB2RUY7 222 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 HTRA2O43464 458 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 POU3F3P20264 500 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 C5AR1P21730 350 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 NPTX2P47972 431 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 TLE1Q04724 770 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 IL10RAQ13651 578 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 ACAP2Q15057 778 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 INAVAQ3KP66 663 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 GADL1Q6ZQY3 521 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 RASAL3Q86YV0 1011 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 AOPEPQ8N6M6 819 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 C1orf162Q8NEQ5 155 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 CLPTM1LQ96KA5 538 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 TRIB1Q96RU8 372 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 SMOQ99835 787 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 PUS7LQ9H0K6 701 aaKnown RBP3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 CALCOCO1Q9P1Z2 691 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 ZNF70Q9UC06 446 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 LIMCH1Q9UPQ0 1083 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 IPPQ9Y573 584 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 FAM208BQ5VWN6 2430 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 KCPQ6ZWJ8 1503 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 BRCA2P51587 3418 aa3.85□□□□□ -1.79
HMGB1P18-201ENST00000438801 E9PLN8 166 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 ANXA1P04083 346 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 EDNRBP24530 442 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 IARSP41252 1262 aaKnown RBP3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 SRSF7Q16629 238 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 C3orf36Q3SXR2 165 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 PPP4R3AQ6IN85 833 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 ZNF425Q6IV72 752 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 FAM9AQ8IZU1 332 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 CBARPQ8N350 705 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 DEFB123Q8N688 67 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 POC1BQ8TC44 478 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 PBKQ96KB5 322 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 DMRTA2Q96SC8 542 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 VKORC1Q9BQB6 163 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 SLC5A4Q9NY91 659 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 USP35Q9P2H5 1018 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 PCDHB1Q9Y5F3 818 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 NR2E3Q9Y5X4 410 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 ADGRA2Q96PE1 1338 aa3.84□□□□□ -1.79
HMGB1P18-201ENST00000438801 ARHGAP35Q9NRY4 1499 aa3.84□□□□□ -1.8
HMGB1P18-201ENST00000438801 NCOR1O75376 2440 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 A0A0B4J269 797 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 KLHL33A6NCF5 533 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 CCDC154A6NI56 674 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 LINC01548A6NM66 108 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 F5H697 171 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 URI1O94763 535 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 TTLL1O95922 423 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 MT-CO1P00395 513 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 RHOP08100 348 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 TUBB3Q13509 450 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 LLGL1Q15334 1064 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 SLC30A10Q6XR72 485 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 SEMA6DQ8NFY4 1073 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 FAXDC2Q96IV6 333 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 ALG8Q9BVK2 526 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 FLRT1Q9NZU1 646 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 MCM8Q9UJA3 840 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 RALYQ9UKM9 306 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms