RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 BDP1A6H8Y1 2624 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 I3L4J1 428 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 HCRTO43612 131 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 TADA2AO75478 443 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 UPP2O95045 317 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 ITGB1P05556 798 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 CALB1P05937 261 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 SETSIPP0DME0 302 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 PTPN1P18031 435 aaKnown RBP13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 PCSK1P29120 753 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 PPIGQ13427 754 aaKnown RBP eCLIP13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 PAN2Q504Q3 1202 aaKnown RBP13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 PKDCCQ504Y2 493 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 LRRC43Q8N309 656 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 B3GALNT2Q8NCR0 500 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 MSANTD4Q8NCY6 345 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 ADAMTS19Q8TE59 1207 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 UBE2Q2Q8WVN8 375 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 C11orf70Q9BRQ4 267 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 OSGEPQ9NPF4 335 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 CTTNBP2NLQ9P2B4 639 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 HESX1Q9UBX0 185 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 CDH9Q9ULB4 789 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 FAN1Q9Y2M0 1017 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 JRKLQ9Y4A0 524 aa13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 TIMM13Q9Y5L4 95 aaPredicted RBP13.09□□□□□ -0.31
HLA-DOB-206ENST00000438763 GRID2IPA4D2P6 1211 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 M0QYV0 167 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 PALMO75781 387 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 GALTP07902 379 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 RRM1P23921 792 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 WDR5P61964 334 aaKnown RBP13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 TUBB2AQ13885 445 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 GOLGA7BQ2TAP0 167 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 PLEKHA7Q6IQ23 1121 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 MMS22LQ6ZRQ5 1243 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 SLFN11Q7Z7L1 901 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 SYCE1Q8N0S2 351 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 THEM5Q8N1Q8 247 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 ANKRD52Q8NB46 1076 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 UBA3Q8TBC4 463 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 HASPINQ8TF76 798 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 STK32AQ8WU08 396 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 ZNF689Q96CS4 500 aaPredicted RBP13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 HNRNPABQ99729 332 aaKnown RBP13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 ACBD6Q9BR61 282 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 TUBB2BQ9BVA1 445 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 NUP85Q9BW27 656 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 MRPL47Q9HD33 250 aaKnown RBP13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 FAM49BQ9NUQ9 324 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 STRIP2Q9ULQ0 834 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 COG5Q9UP83 839 aa13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 PRG3Q9Y2Y8 225 aaPredicted RBP13.08□□□□□ -0.31
HLA-DOB-206ENST00000438763 MICAL3Q7RTP6 2002 aa13.08□□□□□ -0.32
HLA-DOB-206ENST00000438763 FAM170AA1A519 330 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 F8W810 466 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 SYN3O14994 580 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 ATP2C2O75185 946 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 URI1O94763 535 aaPredicted RBP13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 FGBP02675 491 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 ACRP10323 421 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 ACAT1P24752 427 aaKnown RBP13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 GABRB2P47870 512 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 SLC11A1P49279 550 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 GSCP56915 257 aaPredicted RBP13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 KIAA0319Q5VV43 1072 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 PAPD7Q5XG87 772 aaKnown RBP13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 OVOS1Q6IE37 1185 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 TTC30AQ86WT1 665 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 LRRC57Q8N9N7 239 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 ZNF564Q8TBZ8 553 aaPredicted RBP13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 SLC35F5Q8WV83 523 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 C18orf8Q96DM3 657 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 LPIN3Q9BQK8 851 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 RTP3Q9BQQ7 232 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 SYT15Q9BQS2 421 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 MIS12Q9H081 205 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 ABCB6Q9NP58 842 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 PARVAQ9NVD7 372 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 WDR35Q9P2L0 1181 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 CYTH4Q9UIA0 394 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 ADAM28Q9UKQ2 775 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 SCINQ9Y6U3 715 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 MYO9BQ13459 2157 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 ATMINO43313 823 aaPredicted RBP13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 BUB1BO60566 1050 aaPredicted RBP13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 OAZ2O95190 189 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 CCDC130P13994 396 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 PRLRP16471 622 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 BCAT1P54687 386 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 BCAR1P56945 870 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 SNX16P57768 344 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 PSMC1P62191 440 aaKnown RBP13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 DEFB103AP81534 67 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 PLCB3Q01970 1234 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 YWHAHQ04917 246 aaPredicted RBP13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 FPGSQ05932 587 aa13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 BST2Q10589 180 aaKnown RBP13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 ELAVL2Q12926 359 aaKnown RBP13.07□□□□□ -0.32
HLA-DOB-206ENST00000438763 PDCLQ13371 301 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms