RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 TNFRSF18Q9Y5U5 241 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 ARHGEF40Q8TER5 1519 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 SPATA31A6Q5VVP1 1343 aa4.19□□□□□ -1.74
HMGB3P12-201ENST00000438745 ERICH3Q5RHP9 1530 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 A0A088AWK7 358 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 VSTM5A8MXK1 200 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 RBMXL2O75526 392 aaKnown RBP4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 DNAJB5O75953 348 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 C1RP00736 705 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 HSPA6P17066 643 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 HDCP19113 662 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 IL12RB1P42701 662 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 MINDY4Q4G0A6 757 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 PREPLQ4J6C6 727 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 ARHGAP29Q52LW3 1261 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 FAM160B1Q5W0V3 765 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 CXorf57Q6NSI4 855 aaKnown RBP4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 B3GNT9Q6UX72 402 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 NOL8Q76FK4 1167 aaKnown RBP4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 CAMKK1Q8N5S9 505 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 TOR1AIP2Q8NFQ8 470 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 PLBD2Q8NHP8 589 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 SLC35A4Q96G79 324 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 PBKQ96KB5 322 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 AIFM3Q96NN9 605 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 NELL2Q99435 816 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 CGRRF1Q99675 332 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 RSAD1Q9HA92 442 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 NMRK2Q9NPI5 230 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 NR2E3Q9Y5X4 410 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 RAD54BQ9Y620 910 aa4.18□□□□□ -1.74
HMGB3P12-201ENST00000438745 ZCCHC11Q5TAX3 1644 aaKnown RBP4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 FER1L4A9Z1Z3 1794 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 GOLGA6CA6NDK9 693 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 GOLGA6BA6NDN3 693 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 H3BUI4 141 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 CHRM2P08172 466 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 GOLGA6DP0CG33 693 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 PIM1P11309 404 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 GCLCP48506 637 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 GTF2H3Q13889 308 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 GFOD2Q3B7J2 385 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 CCDC157Q569K6 752 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 NXNQ6DKJ4 435 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 DTX2Q86UW9 622 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 ARHGEF25Q86VW2 580 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 SH2D3CQ8N5H7 860 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 B3GALNT2Q8NCR0 500 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 SLC35G2Q8TBE7 412 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 DIS3LQ8TF46 1054 aaKnown RBP4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 ZNF384Q8TF68 577 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 ANKS1AQ92625 1134 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 CCDC136Q96JN2 1154 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 MAP3K14Q99558 947 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 ALG8Q9BVK2 526 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 SLAMF7Q9NQ25 335 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 IL17RBQ9NRM6 502 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 SERTAD4Q9NUC0 356 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 GOLGA6AQ9NYA3 693 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 HESX1Q9UBX0 185 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 DDX20Q9UHI6 824 aaKnown RBP4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 FNDC1Q4ZHG4 1894 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 AOX1Q06278 1338 aa4.17□□□□□ -1.74
HMGB3P12-201ENST00000438745 WRNQ14191 1432 aaPredicted RBP eCLIP4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 LINC00473A8K010 186 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 H3BML4 177 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 DCLK1O15075 740 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 ORC4O43929 436 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 CTNND1O60716 968 aaKnown RBP4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 VPS4BO75351 444 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 GNAI2P04899 355 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 ZNF37AP17032 561 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 ITGALP20701 1170 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 MRPS21P82921 87 aaKnown RBP4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 EXOSC9Q06265 439 aaKnown RBP4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 HNRNPA0Q13151 305 aaKnown RBP4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 RBM20Q5T481 1227 aaKnown RBP4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 MEX3CQ5U5Q3 659 aaKnown RBP4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 VPS53Q5VIR6 699 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 SFRP4Q6FHJ7 346 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 ZBTB34Q8NCN2 500 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 PPP1R35Q8TAP8 253 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 KLHDC4Q8TBB5 520 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 BRIX1Q8TDN6 353 aaKnown RBP4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 SARAFQ96BY9 339 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 FAM136AQ96C01 138 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 MRGPRX1Q96LB2 322 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 ACO2Q99798 780 aaKnown RBP4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 SPATA5L1Q9BVQ7 753 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 TPSD1Q9BZJ3 242 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 SERHLQ9NQF3 203 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 ADARB2Q9NS39 739 aaKnown RBP4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 ASB6Q9NWX5 421 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 GABBR1Q9UBS5 961 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 ADAM21Q9UKJ8 722 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 PCDHA6Q9UN73 950 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 STXBP5LQ9Y2K9 1186 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 MED16Q9Y2X0 877 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 ARHGEF17Q96PE2 2063 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 CAMSAP1Q5T5Y3 1602 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms