RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 KRT34O76011 436 aa10.76□□□□□ -0.69
SHPRH-206ENST00000438092 URODP06132 367 aa10.76□□□□□ -0.69
SHPRH-206ENST00000438092 PTGER2P43116 358 aa10.76□□□□□ -0.69
SHPRH-206ENST00000438092 ACADSBP45954 432 aa10.76□□□□□ -0.69
SHPRH-206ENST00000438092 KPNA1P52294 538 aaPredicted RBP10.76□□□□□ -0.69
SHPRH-206ENST00000438092 GRIN1Q05586 938 aa10.76□□□□□ -0.69
SHPRH-206ENST00000438092 RARS2Q5T160 578 aaKnown RBP10.76□□□□□ -0.69
SHPRH-206ENST00000438092 STYK1Q6J9G0 422 aa10.76□□□□□ -0.69
SHPRH-206ENST00000438092 OTOAQ7RTW8 1153 aa10.76□□□□□ -0.69
SHPRH-206ENST00000438092 COL23A1Q86Y22 540 aaPredicted RBP10.76□□□□□ -0.69
SHPRH-206ENST00000438092 MRPS31Q92665 395 aaKnown RBP10.76□□□□□ -0.69
SHPRH-206ENST00000438092 TIPINQ9BVW5 301 aa10.76□□□□□ -0.69
SHPRH-206ENST00000438092 RNF112Q9ULX5 631 aa10.76□□□□□ -0.69
SHPRH-206ENST00000438092 MAN1A2O60476 641 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 CYP7B1O75881 506 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 SRP72O76094 671 aaKnown RBP10.75□□□□□ -0.69
SHPRH-206ENST00000438092 TRIM16O95361 564 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 SGPL1O95470 568 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 CALR3Q96L12 384 aaKnown RBP10.75□□□□□ -0.69
SHPRH-206ENST00000438092 BPIFA3Q9BQP9 254 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 TSEN34Q9BSV6 310 aaKnown RBP10.75□□□□□ -0.69
SHPRH-206ENST00000438092 GBA2Q9HCG7 927 aaPredicted RBP10.75□□□□□ -0.69
SHPRH-206ENST00000438092 SETD4Q9NVD3 440 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 SMPD4Q9NXE4 827 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 USP20Q9Y2K6 914 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 ABCE1P61221 599 aaKnown RBP10.75□□□□□ -0.69
SHPRH-206ENST00000438092 EFHC1Q5JVL4 640 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 LONP2Q86WA8 852 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 ADGRF2Q8IZF7 708 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 FEZF2Q8TBJ5 459 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 EXOSC4Q9NPD3 245 aaKnown RBP10.75□□□□□ -0.69
SHPRH-206ENST00000438092 TRMT6Q9UJA5 497 aaKnown RBP10.75□□□□□ -0.69
SHPRH-206ENST00000438092 SLC12A8A0AV02 714 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 ARP10275 920 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 KLRC2P26717 231 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 CHI3L1P36222 383 aaPredicted RBP10.75□□□□□ -0.69
SHPRH-206ENST00000438092 ITGA8P53708 1063 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 INPP5AQ14642 412 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 IYDQ6PHW0 289 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 RIN3Q8TB24 985 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 C7orf25Q9BPX7 421 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 PKD2L2Q9NZM6 624 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 WDR35Q9P2L0 1181 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 FBXL21Q9UKT6 434 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 MBD5Q9P267 1494 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 CBX4O00257 560 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 NTSR2O95665 410 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 KLRC1P26715 233 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 NFIAQ12857 509 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 CHI3L2Q15782 390 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 CCDC81Q6ZN84 652 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 NT5DC3Q86UY8 548 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 DNAAF5Q86Y56 855 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 DNAJB3Q8WWF6 145 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 CEP41Q9BYV8 373 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 NIF3L1Q9GZT8 377 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 CNTNAP2Q9UHC6 1331 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 SCAMP3O14828 347 aaKnown RBP10.75□□□□□ -0.69
SHPRH-206ENST00000438092 CLASP2O75122 1294 aaKnown RBP10.75□□□□□ -0.69
SHPRH-206ENST00000438092 ATP5HO75947 161 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 GPC1P35052 558 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 PLOD1Q02809 727 aaPredicted RBP10.75□□□□□ -0.69
SHPRH-206ENST00000438092 STARD3Q14849 445 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 MED8Q96G25 268 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 VPS28Q9UK41 221 aa10.75□□□□□ -0.69
SHPRH-206ENST00000438092 ANO9A1A5B4 782 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 TRPC1P48995 793 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 STAT4Q14765 748 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 WWP1Q9H0M0 922 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 DDX28Q9NUL7 540 aaKnown RBP10.74□□□□□ -0.69
SHPRH-206ENST00000438092 TMEM39AQ9NV64 488 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 RUVBL2Q9Y230 463 aaKnown RBP10.74□□□□□ -0.69
SHPRH-206ENST00000438092 TET3O43151 1660 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 SPATA31E1Q6ZUB1 1445 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 BAZ2BQ9UIF8 2168 aaKnown RBP10.74□□□□□ -0.69
SHPRH-206ENST00000438092 PHF20L1A8MW92 1017 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 MSH4O15457 936 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 WDR47O94967 919 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 GYS1P13807 737 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 FXR1P51114 621 aaKnown RBP eCLIP10.74□□□□□ -0.69
SHPRH-206ENST00000438092 STILQ15468 1287 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 SLC30A10Q6XR72 485 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 TFAP2DQ7Z6R9 452 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 ZSWIM2Q8NEG5 633 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 SNTG2Q9NY99 539 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 CROCC2H7BZ55 1655 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 TBC1D4O60343 1298 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 ERVK-10P10266 1014 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 RAG1P15918 1043 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 VSNL1P62760 191 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 EXOSC10Q01780 885 aaKnown RBP10.74□□□□□ -0.69
SHPRH-206ENST00000438092 EDEM1Q92611 657 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 FAM129AQ9BZQ8 928 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 TDRKHQ9Y2W6 561 aaKnown RBP10.74□□□□□ -0.69
SHPRH-206ENST00000438092 TECPR2O15040 1411 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 CNTNAP5Q8WYK1 1306 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 TPST1O60507 370 aa10.74□□□□□ -0.69
SHPRH-206ENST00000438092 H2AFYO75367 372 aaKnown RBP10.74□□□□□ -0.69
SHPRH-206ENST00000438092 PARNO95453 639 aaKnown RBP10.74□□□□□ -0.69
SHPRH-206ENST00000438092 TCF3P15923 654 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms