RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 PPP2R5EQ16537 467 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 CDO1Q16878 200 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 AGBL2Q5U5Z8 902 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 IZUMO3Q5VZ72 239 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 CDCA2Q69YH5 1023 aaPredicted RBP9.99□□□□□ -0.81
CUX1-206ENST00000437600 PLEKHA7Q6IQ23 1121 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 ANKMY2Q8IV38 441 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 BRSK2Q8IWQ3 736 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 DYDC1Q8WWB3 177 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 CDHR5Q9HBB8 845 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 VTA1Q9NP79 307 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 PARVAQ9NVD7 372 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 A0A087WUV0 522 aaPredicted RBP9.99□□□□□ -0.81
CUX1-206ENST00000437600 SPAG7O75391 227 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 ITGB3P05106 788 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 MMP3P08254 477 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 HOXC6P09630 235 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 NUDT17P0C025 328 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 ARF4P18085 180 aaPredicted RBP9.99□□□□□ -0.81
CUX1-206ENST00000437600 IL1R2P27930 398 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 SP3Q02447 781 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 TNFAIP2Q03169 654 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 GPS1Q13098 491 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 KLF1Q13351 362 aaPredicted RBP9.99□□□□□ -0.81
CUX1-206ENST00000437600 TCEAL1Q15170 157 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 GRIK4Q16099 956 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 DNAJC24Q6P3W2 148 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 MPZL3Q6UWV2 235 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 ZPBP2Q6X784 338 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 ARFGAP1Q8N6T3 406 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 PLVAPQ9BX97 442 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 MAGEB5Q9BZ81 275 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 MAF1Q9H063 256 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 SDCBP2Q9H190 292 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 C12orf65Q9H3J6 166 aaKnown RBP9.99□□□□□ -0.81
CUX1-206ENST00000437600 SMYD3Q9H7B4 428 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 SYNCQ9H7C4 482 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 ATP8B3O60423 1300 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 GOLGA6L7A0A1B0GV03 622 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 TMEM191CA6NGB0 347 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 ZC3H11AO75152 810 aaKnown RBP eCLIP9.98□□□□□ -0.813e-6■■■■□ 25.7
CUX1-206ENST00000437600 GAS8O95995 478 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 HSPA6P17066 643 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 MAP2K2P36507 400 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 ARSEP51690 589 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 GDF10P55107 478 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 EIF3BP55884 814 aaKnown RBP9.98□□□□□ -0.81
CUX1-206ENST00000437600 AMHR2Q16671 573 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 DUSP28Q4G0W2 176 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 PTPN20Q4JDL3 420 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 EMC10Q5UCC4 262 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 HOOK3Q86VS8 718 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 SNF8Q96H20 258 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 PIWIL1Q96J94 861 aaKnown RBP9.98□□□□□ -0.81
CUX1-206ENST00000437600 CPXM1Q96SM3 734 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 RBM15Q96T37 977 aaKnown RBP eCLIP9.98□□□□□ -0.811e-11■■■■□ 20.4
CUX1-206ENST00000437600 APOL6Q9BWW8 343 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 ABHD16BQ9H3Z7 469 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 MRPL47Q9HD33 250 aaKnown RBP9.98□□□□□ -0.81
CUX1-206ENST00000437600 CPSF3Q9UKF6 684 aaKnown RBP9.98□□□□□ -0.81
CUX1-206ENST00000437600 TMEM120BA0PK00 339 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 LACTBL1A8MY62 500 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 SGK1O00141 431 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 HCRTO43612 131 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 CPP00450 1065 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 FNTAP49354 379 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 TFDP1Q14186 410 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 HIC1Q14526 733 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 MARCH8Q5T0T0 291 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 C6orf118Q5T5N4 469 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 ERMARDQ5T6L9 678 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 MTHFD1LQ6UB35 978 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 TRPV1Q8NER1 839 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 HSPH1Q92598 858 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 OSMRQ99650 979 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 XYLT2Q9H1B5 865 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 FZD8Q9H461 694 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.98□□□□□ -0.813e-7■■■■■ 27.8
CUX1-206ENST00000437600 NINJ2Q9NZG7 142 aa9.98□□□□□ -0.81
CUX1-206ENST00000437600 TTC4O95801 387 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 STAG3L1P0CL83 205 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 ITIH2P19823 946 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 ASPAP45381 313 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 MMP13P45452 471 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 RGS7P49802 495 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 SLC26A2P50443 739 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 MCL1Q07820 350 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 MMRN1Q13201 1228 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 SLMAPQ14BN4 828 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 SGSM1Q2NKQ1 1148 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 FAM133BQ5BKY9 247 aaKnown RBP9.97□□□□□ -0.81
CUX1-206ENST00000437600 GLRA4Q5JXX5 417 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 JADE1Q6IE81 842 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 C1orf127Q8N9H9 656 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 NETO2Q8NC67 525 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 USP6NLQ92738 828 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 CHMP6Q96FZ7 201 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 SAYSD1Q9NPB0 183 aa9.97□□□□□ -0.81
CUX1-206ENST00000437600 AVENQ9NQS1 362 aaPredicted RBP9.97□□□□□ -0.81
CUX1-206ENST00000437600 SIX4Q9UIU6 781 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms