RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 C4orf50Q6ZRC1 276 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 YAF2Q8IY57 180 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 CCDC105Q8IYK2 499 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 ENGASEQ8NFI3 743 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 TMC2Q8TDI7 906 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 TMEM174Q8WUU8 243 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 SMG9Q9H0W8 520 aaKnown RBP19.57■□□□□ 0.72
HMGN1-207ENST00000436324 TASP1Q9H6P5 420 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.57■□□□□ 0.721e-9■■■■■ 62.2
HMGN1-207ENST00000436324 MTF2Q9Y483 593 aaPredicted RBP19.57■□□□□ 0.72
HMGN1-207ENST00000436324 KANSL1LA0AUZ9 987 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 SLC38A8A6NNN8 435 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 ZNF263O14978 683 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 TACC1O75410 805 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 AKAP3O75969 853 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 BDNFP23560 247 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 RAP1GAPP47736 663 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 NLRP12P59046 1061 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 CLDN10P78369 228 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 PRKCQQ04759 706 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 ADAM9Q13443 819 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 CFAP221Q4G0U5 840 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 ZNF667Q5HYK9 610 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 MFSD6LQ8IWD5 586 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 PJA1Q8NG27 643 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 DEPDC1BQ8WUY9 529 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 SLC46A2Q9BY10 475 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 DPEP3Q9H4B8 488 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 SMYD3Q9H7B4 428 aa19.56■□□□□ 0.72
HMGN1-207ENST00000436324 FAM170BA6NMN3 283 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 A8MXQ7 604 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 STAU1O95793 577 aaKnown RBP19.55■□□□□ 0.72
HMGN1-207ENST00000436324 F11P03951 625 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 TRIM49P0CI25 452 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 TRIM49CP0CI26 452 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 PTPN1P18031 435 aaKnown RBP19.55■□□□□ 0.72
HMGN1-207ENST00000436324 GRIK1P39086 918 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 VAMP7P51809 220 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 MAPRE1Q15691 268 aaKnown RBP19.55■□□□□ 0.72
HMGN1-207ENST00000436324 C1orf220Q5T0J3 134 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 SV2AQ7L0J3 742 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 TMEM150AQ86TG1 271 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 FAM186BQ8IYM0 893 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 MAB21L3Q8N8X9 362 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 MYCBPAPQ8TBZ2 947 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 IRF7Q92985 503 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 E2F7Q96AV8 911 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 EEF2KMTQ96G04 330 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 PCED1BQ96HM7 432 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 FUBP3Q96I24 572 aaKnown RBP eCLIP19.55■□□□□ 0.72
HMGN1-207ENST00000436324 LRRC3BQ96PB8 259 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 MMRN2Q9H8L6 949 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 RMND1Q9NWS8 449 aa19.55■□□□□ 0.72
HMGN1-207ENST00000436324 NOL4O94818 638 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 SMC2O95347 1197 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 PRAMEF12O95522 483 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 KRT13P13646 458 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 RPL13P26373 211 aaKnown RBP19.54■□□□□ 0.72
HMGN1-207ENST00000436324 PIK3CAP42336 1068 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 PRCPP42785 496 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 MRE11P49959 708 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 NFIL3Q16649 462 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 TXNDC8Q6A555 127 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 DNASE1L2Q92874 299 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 SMARCE1Q969G3 411 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 DDX23Q9BUQ8 820 aaKnown RBP19.54■□□□□ 0.72
HMGN1-207ENST00000436324 SDCBP2Q9H190 292 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 IRF2BPLQ9H1B7 796 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 LTB4R2Q9NPC1 389 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 PCDHA5Q9Y5H7 936 aa19.54■□□□□ 0.72
HMGN1-207ENST00000436324 MAPK13O15264 365 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 HLA-DRAP01903 254 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 FAM163BP0C2L3 166 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 GLULP15104 373 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 PSMC2P35998 433 aaKnown RBP19.53■□□□□ 0.72
HMGN1-207ENST00000436324 MAGEA11P43364 429 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 GCLMP48507 274 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 ANGPT1Q15389 498 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 SGSM1Q2NKQ1 1148 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 ZACNQ401N2 412 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 ISM2Q6H9L7 571 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 SPOPLQ6IQ16 392 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 ZNF852Q6ZMS4 543 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 CMTM8Q8IZV2 173 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 TTC8Q8TAM2 541 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 MRPS31Q92665 395 aaKnown RBP19.53■□□□□ 0.72
HMGN1-207ENST00000436324 ZFYVE19Q96K21 471 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 VRTNQ9H8Y1 702 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 TRPC7Q9HCX4 862 aa19.53■□□□□ 0.72
HMGN1-207ENST00000436324 UXTQ9UBK9 157 aaPredicted RBP19.53■□□□□ 0.72
HMGN1-207ENST00000436324 NDRG2Q9UN36 371 aaKnown RBP19.53■□□□□ 0.72
HMGN1-207ENST00000436324 CLDN5O00501 218 aa19.52■□□□□ 0.72
HMGN1-207ENST00000436324 IKBKBO14920 756 aa19.52■□□□□ 0.72
HMGN1-207ENST00000436324 GADD45BO75293 160 aaPredicted RBP19.52■□□□□ 0.72
HMGN1-207ENST00000436324 TARSP26639 723 aaKnown RBP19.52■□□□□ 0.72
HMGN1-207ENST00000436324 ANXA13P27216 316 aa19.52■□□□□ 0.72
HMGN1-207ENST00000436324 ZCWPW2Q504Y3 356 aa19.52■□□□□ 0.72
HMGN1-207ENST00000436324 ZNF658Q5TYW1 1059 aaPredicted RBP19.52■□□□□ 0.72
HMGN1-207ENST00000436324 VSTM1Q6UX27 236 aa19.52■□□□□ 0.72
HMGN1-207ENST00000436324 INTS8Q75QN2 995 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms