RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 EXOC1LA0A1B0GW35 172 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 H7C0C1 242 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 SOCS7O14512 581 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 TBXAS1P24557 533 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-203ENST00000434376 SSTR1P30872 391 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 RFC5P40937 340 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 ATP5OP48047 213 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 NDST1P52848 882 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 OTUD4Q01804 1114 aaKnown RBP16.38■□□□□ 0.21
SCARF1-203ENST00000434376 ZNF252P-AS1Q0IIN9 211 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 C15orf39Q6ZRI6 1047 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 ENOSF1Q7L5Y1 443 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-203ENST00000434376 ADPGKQ9BRR6 497 aa16.38■□□□□ 0.21
SCARF1-203ENST00000434376 COL11A1P12107 1806 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-203ENST00000434376 ZBTB42B2RXF5 422 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 LCP1P13796 627 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 PECAM1P16284 738 aaPredicted RBP16.37■□□□□ 0.21
SCARF1-203ENST00000434376 CDH6P55285 790 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 KCNJ2P63252 427 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 MXD4Q14582 209 aaPredicted RBP16.37■□□□□ 0.21
SCARF1-203ENST00000434376 FAM47CQ5HY64 1035 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 CFAP57Q96MR6 1250 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 MPHOSPH6Q99547 160 aaKnown RBP16.37■□□□□ 0.21
SCARF1-203ENST00000434376 TRIM56Q9BRZ2 755 aaKnown RBP16.37■□□□□ 0.21
SCARF1-203ENST00000434376 AAASQ9NRG9 546 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 ERAP1Q9NZ08 941 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 TIMM13Q9Y5L4 95 aaPredicted RBP16.37■□□□□ 0.21
SCARF1-203ENST00000434376 E2F8A0AVK6 867 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 ENO4A6NNW6 628 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 A8MUI8 341 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 AVILO75366 819 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 EFNA5P52803 228 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 AUHQ13825 339 aaKnown RBP16.37■□□□□ 0.21
SCARF1-203ENST00000434376 TARBP2Q15633 366 aaKnown RBP16.37■□□□□ 0.21
SCARF1-203ENST00000434376 CTU1Q7Z7A3 348 aaKnown RBP16.37■□□□□ 0.21
SCARF1-203ENST00000434376 FGD4Q96M96 766 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 NEU2Q9Y3R4 380 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 CITO14578 2027 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 RASA4BC9J798 803 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 RASA4O43374 803 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 ANP32DO95626 131 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 MMP8P22894 467 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 ACAT1P24752 427 aaKnown RBP16.37■□□□□ 0.21
SCARF1-203ENST00000434376 TFDP1Q14186 410 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 ARMC9Q7Z3E5 817 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 CTAGE3PQ8IX95 158 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 ELOVL4Q9GZR5 314 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 GINM1Q9NU53 330 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 SIX4Q9UIU6 781 aa16.37■□□□□ 0.21
SCARF1-203ENST00000434376 DIS3Q9Y2L1 958 aaKnown RBP16.37■□□□□ 0.21
SCARF1-203ENST00000434376 E5RJQ4 531 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 ACKR2O00590 384 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 FSCN2O14926 492 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 ERBB2P04626 1255 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 CYP1A1P04798 512 aaPredicted RBP16.36■□□□□ 0.21
SCARF1-203ENST00000434376 PDGFRAP16234 1089 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 STX2P32856 288 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 IRX4P78413 519 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 EXOC3L1Q86VI1 746 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 CCT6BQ92526 530 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 MAK16Q9BXY0 300 aaKnown RBP16.36■□□□□ 0.21
SCARF1-203ENST00000434376 NIFKQ9BYG3 293 aaKnown RBP16.36■□□□□ 0.21
SCARF1-203ENST00000434376 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.36■□□□□ 0.21
SCARF1-203ENST00000434376 NINJ2Q9NZG7 142 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 PCYOX1Q9UHG3 505 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 CPSF3Q9UKF6 684 aaKnown RBP16.36■□□□□ 0.21
SCARF1-203ENST00000434376 F7P08709 466 aaPredicted RBP16.36■□□□□ 0.21
SCARF1-203ENST00000434376 WDR49Q8IV35 697 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 KLHL29Q96CT2 875 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 EIF2AQ9BY44 585 aaKnown RBP16.36■□□□□ 0.21
SCARF1-203ENST00000434376 IP6K2Q9UHH9 426 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 TRIM33Q9UPN9 1127 aa16.36■□□□□ 0.21
SCARF1-203ENST00000434376 RNF8O76064 485 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 UBOX5O94941 541 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 IGFBP6P24592 240 aaPredicted RBP16.35■□□□□ 0.21
SCARF1-203ENST00000434376 GPRC5AQ8NFJ5 357 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 SCINQ9Y6U3 715 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 ATXN2Q99700 1313 aaKnown RBP16.35■□□□□ 0.21
SCARF1-203ENST00000434376 A0A0G2JLL6 359 aaPredicted RBP16.35■□□□□ 0.21
SCARF1-203ENST00000434376 HSPA6P17066 643 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 PPP2R5DQ14738 602 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 ZC3H12AQ5D1E8 599 aaKnown RBP16.35■□□□□ 0.21
SCARF1-203ENST00000434376 ANKRD22Q5VYY1 191 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 SPOCD1Q6ZMY3 1216 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 PRRT2Q7Z6L0 340 aaPredicted RBP16.35■□□□□ 0.21
SCARF1-203ENST00000434376 OR6J1Q8NGC5 347 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 CLEC4CQ8WTT0 213 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 CHMP2BQ9UQN3 213 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 CCDC78A2IDD5 438 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 MAPK13O15264 365 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 HBP1O60381 514 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 MICAL2O94851 1124 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 ATG7O95352 703 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 RARBP10826 455 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 MAGEA4P43358 317 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 ASPAP45381 313 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 SNRPFP62306 86 aaKnown RBP16.35■□□□□ 0.21
SCARF1-203ENST00000434376 GHRHRQ02643 423 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 TMEM132DQ14C87 1099 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms