RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 SUMO4Q6EEV6 95 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 RGS7BPQ6MZT1 257 aaPredicted RBP4.22□□□□□ -1.73
CLK1-204ENST00000432425 CXorf57Q6NSI4 855 aaKnown RBP4.22□□□□□ -1.73
CLK1-204ENST00000432425 EPM2AIP1Q7L775 607 aaPredicted RBP4.22□□□□□ -1.73
CLK1-204ENST00000432425 OR6B3Q8NGW1 331 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 MRGPRX1Q96LB2 322 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 ANLNQ9NQW6 1124 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 NOB1Q9ULX3 412 aaKnown RBP4.22□□□□□ -1.73
CLK1-204ENST00000432425 FRMD4BQ9Y2L6 1034 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 QSOX1O00391 747 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 CTNND1O60716 968 aaKnown RBP4.22□□□□□ -1.73
CLK1-204ENST00000432425 ONECUT2O95948 504 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 HNRNPCP07910 306 aaKnown RBP eCLIP4.22□□□□□ -1.73
CLK1-204ENST00000432425 CYP2C9P11712 490 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 LRPAP1P30533 357 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 SLC11A2P49281 568 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 WNT3P56703 355 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 PROK1P58294 105 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 GPSM2P81274 684 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 KRT17Q04695 432 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 ANO6Q4KMQ2 910 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 TREML2Q5T2D2 321 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 ZKSCAN2Q63HK3 967 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 LMBRD2Q68DH5 695 aaPredicted RBP4.22□□□□□ -1.73
CLK1-204ENST00000432425 FCRLBQ6BAA4 426 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 MAVSQ7Z434 540 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 HASPINQ8TF76 798 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 KBTBD7Q8WVZ9 684 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 TRIM54Q9BYV2 358 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 GLOD4Q9HC38 313 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 ADAM21Q9UKJ8 722 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 SH2B3Q9UQQ2 575 aa4.22□□□□□ -1.73
CLK1-204ENST00000432425 THRAP3Q9Y2W1 955 aaKnown RBP4.22□□□□□ -1.73
CLK1-204ENST00000432425 PHGDHO43175 533 aaKnown RBP4.21□□□□□ -1.74
CLK1-204ENST00000432425 FAM163BP0C2L3 166 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 MYBP10242 640 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 KITP10721 976 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 NPR1P16066 1061 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 PCSK6P29122 969 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 PPP2R5AQ15172 486 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 MGAT5BQ3V5L5 792 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 CEP85Q6P2H3 762 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 ANKRD16Q6P6B7 361 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 SLC29A4Q7RTT9 530 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 ZNF804AQ7Z570 1209 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 WDR53Q7Z5U6 358 aaPredicted RBP4.21□□□□□ -1.74
CLK1-204ENST00000432425 CHPFQ8IZ52 775 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 DNAJC5GQ8N7S2 189 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 ATG4AQ8WYN0 398 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 NT5C1BQ96P26 610 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 B3GNT5Q9BYG0 378 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 ZMAT3Q9HA38 289 aaKnown RBP4.21□□□□□ -1.74
CLK1-204ENST00000432425 NDRG4Q9ULP0 352 aaKnown RBP4.21□□□□□ -1.74
CLK1-204ENST00000432425 SSX2IPQ9Y2D8 614 aa4.21□□□□□ -1.74
CLK1-204ENST00000432425 LOC105371045A0A1W2PR82 267 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 MANSC4A6NHS7 340 aaPredicted RBP4.2□□□□□ -1.74
CLK1-204ENST00000432425 TBC1D4O60343 1298 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 TUSC2O75896 110 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 SCGB1D2O95969 90 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 CDK4P11802 303 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 CYP2C18P33260 490 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 LIPAP38571 399 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 PDE6CP51160 858 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 AGFG1P52594 562 aaKnown RBP4.2□□□□□ -1.74
CLK1-204ENST00000432425 PDE1AP54750 535 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 MINDY4Q4G0A6 757 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 NPNTQ6UXI9 565 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 OVCH2Q7RTZ1 564 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 SLC15A3Q8IY34 581 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 MPP5Q8N3R9 675 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 LRRC71Q8N4P6 559 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 SLC15A4Q8N697 577 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 FANCBQ8NB91 859 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 TBC1D5Q92609 795 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 ZSCAN32Q9NX65 697 aa4.2□□□□□ -1.74
CLK1-204ENST00000432425 CCNL1Q9UK58 526 aaPredicted RBP4.2□□□□□ -1.74
CLK1-204ENST00000432425 A0A087WWL8 130 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 CAPN8A6NHC0 703 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 H0YIZ8 118 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 hCG_1984214I3L0E3 225 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 BTN3A1O00481 513 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 JTBO76095 146 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 PRKCGP05129 697 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 JUPP14923 745 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 SLC7A1P30825 629 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 TPTEP56180 551 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 EEFSECP57772 596 aaKnown RBP4.19□□□□□ -1.74
CLK1-204ENST00000432425 RAB32Q13637 225 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 SLC44A4Q53GD3 710 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 AARS2Q5JTZ9 985 aaKnown RBP4.19□□□□□ -1.74
CLK1-204ENST00000432425 FAM102BQ5T8I3 360 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 RAVER1Q8IY67 606 aaKnown RBP4.19□□□□□ -1.74
CLK1-204ENST00000432425 JDP2Q8WYK2 163 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 GLG1Q92896 1179 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 RUNDC1Q96C34 613 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 SH3BP4Q9P0V3 963 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.19□□□□□ -1.74
CLK1-204ENST00000432425 TCEAL9Q9UHQ7 104 aa4.19□□□□□ -1.74
CLK1-204ENST00000432425 MRPS17Q9Y2R5 130 aaKnown RBP4.19□□□□□ -1.74
CLK1-204ENST00000432425 A1L4Q6 167 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms