RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 MAML1Q92585 1016 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 RAB24Q969Q5 203 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 ABHD8Q96I13 439 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 PPM1MQ96MI6 270 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 GDF15Q99988 308 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 SIK2Q9H0K1 926 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 ZHX3Q9H4I2 956 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 AS3MTQ9HBK9 375 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 A1CFQ9NQ94 594 aaKnown RBP4.76□□□□□ -1.65
HMGB3-203ENST00000430118 SACM1LQ9NTJ5 587 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 USP40Q9NVE5 1235 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 SRRDQ9UH36 339 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 FBXO9Q9UK97 447 aaPredicted RBP4.76□□□□□ -1.65
HMGB3-203ENST00000430118 CDC42EP3Q9UKI2 254 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 SLC39A10Q9ULF5 831 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 SCINQ9Y6U3 715 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 KIF13BQ9NQT8 1826 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 C2orf78A6NCI8 922 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 NPC1O15118 1278 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 NCAM2O15394 837 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 ADAMTS4O75173 837 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 SLC43A1O75387 559 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 TOX4O94842 621 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 CHEK2O96017 543 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 GNAI2P04899 355 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 MMP10P09238 476 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 RARBP10826 455 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 ALAS1P13196 640 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 IDEP14735 1019 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 RPL13P26373 211 aaKnown RBP4.75□□□□□ -1.65
HMGB3-203ENST00000430118 IL13P35225 146 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 PTPN7P35236 360 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 SERPINF1P36955 418 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 KCNJ5P48544 419 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 MRE11P49959 708 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 MLLT6P55198 1093 aaPredicted RBP4.75□□□□□ -1.65
HMGB3-203ENST00000430118 GALNT1Q10472 559 aaPredicted RBP4.75□□□□□ -1.65
HMGB3-203ENST00000430118 GRM1Q13255 1194 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 ADAM15Q13444 863 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 PTK2BQ14289 1009 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 PCOLCEQ15113 449 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 PFKFB4Q16877 469 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 CCDC93Q567U6 631 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 PRAMEF14Q5SWL7 426 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 PHF19Q5T6S3 580 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 WDR78Q5VTH9 848 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 AGBL4Q5VU57 503 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 Q6ZUG5 572 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 IGDCC3Q8IVU1 814 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 ABI1Q8IZP0 508 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 GALNT15Q8N3T1 639 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 NME8Q8N427 588 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 RAPGEF4Q8WZA2 1011 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 TNPO1Q92973 898 aaKnown RBP4.75□□□□□ -1.65
HMGB3-203ENST00000430118 USP13Q92995 863 aaPredicted RBP4.75□□□□□ -1.65
HMGB3-203ENST00000430118 ZBTB8AQ96BR9 441 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 TBC1D20Q96BZ9 403 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 EID2BQ96D98 161 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 P2RX7Q99572 595 aaKnown RBP4.75□□□□□ -1.65
HMGB3-203ENST00000430118 PACSIN1Q9BY11 444 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 ENKD1Q9H0I2 346 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 UNC45AQ9H3U1 944 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 BRD9Q9H8M2 597 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 L2HGDHQ9H9P8 463 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 GPR35Q9HC97 309 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.75□□□□□ -1.65
HMGB3-203ENST00000430118 SPATA6Q9NWH7 488 aaPredicted RBP4.75□□□□□ -1.65
HMGB3-203ENST00000430118 DACT1Q9NYF0 836 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 FAM53CQ9NYF3 392 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 JKAMPQ9P055 326 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 PLEKHM1Q9Y4G2 1056 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 ACTL7AQ9Y615 435 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 CNTNAP1P78357 1384 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 MON2Q7Z3U7 1717 aa4.75□□□□□ -1.65
HMGB3-203ENST00000430118 ARFGEF1Q9Y6D6 1849 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 KAT6BQ8WYB5 2073 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 A0A087WWL8 130 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 GLTPD2A6NH11 291 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 GRM6O15303 877 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 FOXN1O15353 648 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 AHSGP02765 367 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 ITGA5P08648 1049 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 SNRPA1P09661 255 aaKnown RBP4.74□□□□□ -1.65
HMGB3-203ENST00000430118 BDNFP23560 247 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 ALDH1A3P47895 512 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 CARSP49589 748 aaKnown RBP4.74□□□□□ -1.65
HMGB3-203ENST00000430118 GZMKP49863 264 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 ADCY7P51828 1080 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 WNT3P56703 355 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 MAP2K1Q02750 393 aaPredicted RBP4.74□□□□□ -1.65
HMGB3-203ENST00000430118 EXOSC9Q06265 439 aaKnown RBP4.74□□□□□ -1.65
HMGB3-203ENST00000430118 LMOD3Q0VAK6 560 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 DDX10Q13206 875 aaKnown RBP4.74□□□□□ -1.65
HMGB3-203ENST00000430118 NFYCQ13952 458 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 SPARCL1Q14515 664 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 USP10Q14694 798 aaKnown RBP4.74□□□□□ -1.65
HMGB3-203ENST00000430118 C3orf38Q5JPI3 329 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 KLHDC7AQ5VTJ3 777 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 CNKSR3Q6P9H4 555 aa4.74□□□□□ -1.65
HMGB3-203ENST00000430118 ZNF365Q70YC5 407 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms