RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 NAIF1Q69YI7 327 aaPredicted RBP18.34■□□□□ 0.53
CPSF4-203ENST00000430038 ZC3H14Q6PJT7 736 aaKnown RBP18.34■□□□□ 0.53
CPSF4-203ENST00000430038 UNC13DQ70J99 1090 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 TRAPPC11Q7Z392 1133 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 TMEM86AQ8N2M4 240 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 CSGALNACT1Q8TDX6 532 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 ELMO3Q96BJ8 720 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 FAM83CQ9BQN1 747 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 SLC39A2Q9NP94 309 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 SERTAD1Q9UHV2 236 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 ZDHHC9Q9Y397 364 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 PCDHGA2Q9Y5H1 932 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 DPYSL4O14531 572 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 KINO60870 393 aaKnown RBP18.33■□□□□ 0.52
CPSF4-203ENST00000430038 NOL4O94818 638 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 PDGFRBP09619 1106 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 CYP2J2P51589 502 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 PON2Q15165 354 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 SNRNP35Q16560 246 aaKnown RBP18.33■□□□□ 0.52
CPSF4-203ENST00000430038 NFE2Q16621 373 aaPredicted RBP18.33■□□□□ 0.52
CPSF4-203ENST00000430038 DUOXA2Q1HG44 320 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 ARHGAP29Q52LW3 1261 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 PKN3Q6P5Z2 889 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 CELF5Q8N6W0 485 aaKnown RBP18.33■□□□□ 0.52
CPSF4-203ENST00000430038 RMDN1Q96DB5 314 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 ANKRD36BP1Q96IX9 119 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 MRPL45Q9BRJ2 306 aaKnown RBP18.33■□□□□ 0.52
CPSF4-203ENST00000430038 FBRSL1Q9HCM7 1045 aaKnown RBP18.33■□□□□ 0.52
CPSF4-203ENST00000430038 TMEM30AQ9NV96 361 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 RCOR1Q9UKL0 485 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 CACNA1AO00555 2505 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 EML5Q05BV3 1969 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 MYO16Q9Y6X6 1858 aa18.33■□□□□ 0.52
CPSF4-203ENST00000430038 MYOFQ9NZM1 2061 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 HELZP42694 1942 aaKnown RBP18.32■□□□□ 0.52
CPSF4-203ENST00000430038 K7ESF4 209 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 KIAA0391O15091 583 aaKnown RBP18.32■□□□□ 0.52
CPSF4-203ENST00000430038 ID4P47928 161 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 CASP4P49662 377 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 AMPD3Q01432 767 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 MYL7Q01449 175 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 CYP24A1Q07973 514 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 CCINQ13939 588 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 TAF12Q16514 161 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 MON1AQ86VX9 555 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 WDR49Q8IV35 697 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 ATRIPQ8WXE1 791 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 RUBCNQ92622 972 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 MYRFLQ96LU7 910 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 LRRC27Q9C0I9 530 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 EPC1Q9H2F5 836 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 C8orf33Q9H7E9 229 aaPredicted RBP18.32■□□□□ 0.52
CPSF4-203ENST00000430038 ABCB6Q9NP58 842 aa18.32■□□□□ 0.52
CPSF4-203ENST00000430038 ACTN4O43707 911 aaKnown RBP18.31■□□□□ 0.52
CPSF4-203ENST00000430038 TNNC2P02585 160 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 CSH1P0DML2 217 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 CSH2P0DML3 217 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 DLATP10515 647 aaKnown RBP18.31■□□□□ 0.52
CPSF4-203ENST00000430038 ARSAP15289 507 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 TGM1P22735 817 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 ME1P48163 572 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 LHX1P48742 406 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 CACNA2D1P54289 1103 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 USP46P62068 366 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 ZXDBP98169 803 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 STK4Q13043 487 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 PSMD6Q15008 389 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 BMT2Q1RMZ1 405 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 CFAP221Q4G0U5 840 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 DPH6Q7L8W6 267 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 RALGPS2Q86X27 583 aaPredicted RBP18.31■□□□□ 0.52
CPSF4-203ENST00000430038 HSCBQ8IWL3 235 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 SCN4BQ8IWT1 228 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 CCDC127Q96BQ5 260 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 SYT15Q9BQS2 421 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 EBF3Q9H4W6 596 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 TDP1Q9NUW8 608 aa18.31■□□□□ 0.52
CPSF4-203ENST00000430038 POLR3BQ9NW08 1133 aaPredicted RBP18.31■□□□□ 0.52
CPSF4-203ENST00000430038 RALGAPA1Q6GYQ0 2036 aa18.3■□□□□ 0.52
CPSF4-203ENST00000430038 C2orf78A6NCI8 922 aa18.3■□□□□ 0.52
CPSF4-203ENST00000430038 WARSP23381 471 aaKnown RBP18.3■□□□□ 0.52
CPSF4-203ENST00000430038 BDNFP23560 247 aa18.3■□□□□ 0.52
CPSF4-203ENST00000430038 SRSF5Q13243 272 aaKnown RBP18.3■□□□□ 0.52
CPSF4-203ENST00000430038 STXBP4Q6ZWJ1 553 aa18.3■□□□□ 0.52
CPSF4-203ENST00000430038 SPATA2LQ8IUW3 424 aaPredicted RBP18.3■□□□□ 0.52
CPSF4-203ENST00000430038 XXYLT1Q8NBI6 393 aa18.3■□□□□ 0.52
CPSF4-203ENST00000430038 KIAA0895Q8NCT3 520 aa18.3■□□□□ 0.52
CPSF4-203ENST00000430038 SPATA18Q8TC71 538 aa18.3■□□□□ 0.52
CPSF4-203ENST00000430038 MYLPFQ96A32 169 aa18.3■□□□□ 0.52
CPSF4-203ENST00000430038 TRMT2BQ96GJ1 504 aaKnown RBP18.3■□□□□ 0.52
CPSF4-203ENST00000430038 CGRRF1Q99675 332 aa18.3■□□□□ 0.52
CPSF4-203ENST00000430038 XYLT2Q9H1B5 865 aa18.3■□□□□ 0.52
CPSF4-203ENST00000430038 DPEP3Q9H4B8 488 aa18.3■□□□□ 0.52
CPSF4-203ENST00000430038 KIAA1586Q9HCI6 787 aa18.3■□□□□ 0.52
CPSF4-203ENST00000430038 GCNT4Q9P109 453 aa18.3■□□□□ 0.52
CPSF4-203ENST00000430038 PVALEFA0A1B0GWK0 134 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 CHURC1-FNTBB4DL54 471 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 HRO43593 1189 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 TNNI1P19237 187 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 CXCL12P48061 93 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms