RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 LVRNQ6Q4G3 990 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 MAEAQ7L5Y9 396 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 CFAP52Q8N1V2 620 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 SLC17A8Q8NDX2 589 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 SUPT20HQ8NEM7 779 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 TMIEQ8NEW7 156 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 KLHDC4Q8TBB5 520 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 TNPO1Q92973 898 aaKnown RBP3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 SMOQ99835 787 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 CNPPD1Q9BV87 410 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 C1orf43Q9BWL3 253 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 TLR10Q9BXR5 811 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 WDR11Q9BZH6 1224 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 MRPL46Q9H2W6 279 aaKnown RBP3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 TBCCD1Q9NVR7 557 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 C9orf78Q9NZ63 289 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 ANKFY1Q9P2R3 1169 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 HSFX1Q9UBD0 423 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 TESQ9UGI8 421 aaKnown RBP3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 GPR52Q9Y2T5 361 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 PCDHGB2Q9Y5G2 931 aa3.58□□□□□ -1.84
HMGB1P9-201ENST00000429856 TRGV11A0A075B6L2 103 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 A0A088AWK7 358 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 PRAMEF33A0A0G2JMD5 474 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 UNC119BA6NIH7 251 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 PRAMEF10O60809 474 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 SOAT2O75908 522 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 USP19O94966 1318 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 MATN4O95460 622 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 ITGAMP11215 1152 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 FDXRP22570 491 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 BDNFP23560 247 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 CTGFP29279 349 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 ANXA11P50995 505 aaKnown RBP3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 ZNF135P52742 658 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 PSMC1P62191 440 aaKnown RBP3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 GPSM2P81274 684 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 COL4A3Q01955 1670 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 ZNF543Q08ER8 600 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 TCF15Q12870 199 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 IFIT5Q13325 482 aaKnown RBP3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 PMS2P11Q13670 270 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 FGL2Q14314 439 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 HABP2Q14520 560 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 HLXQ14774 488 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 PREPLQ4J6C6 727 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 HECTD2Q5U5R9 776 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 TAPT1Q6NXT6 567 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 Q6YL49 198 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 DAAM2Q86T65 1068 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 SH2D3CQ8N5H7 860 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 MYCT1Q8N699 235 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 PDPRQ8NCN5 879 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 SLC9A6Q92581 669 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 NELL1Q92832 810 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 TRIB1Q96RU8 372 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 NAP1L4Q99733 375 aaKnown RBP3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 UNKLQ9H9P5 680 aaKnown RBP3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 CERS4Q9HA82 394 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 AS3MTQ9HBK9 375 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 SLAMF7Q9NQ25 335 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 MAP3K20Q9NYL2 800 aaKnown RBP3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 CTTNBP2NLQ9P2B4 639 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 SLC45A2Q9UMX9 530 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 PCDHA1Q9Y5I3 950 aa3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P9-201ENST00000429856 A0A087WV62 115 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 CCDC78A2IDD5 438 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 GRID2IPA4D2P6 1211 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 RHPN2P1A8MT19 583 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 E9PLN8 166 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 POLRMTO00411 1230 aaKnown RBP3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 TOR1BO14657 336 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 AGR2O95994 175 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 FAM163BP0C2L3 166 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 MYF5P13349 255 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 PPM1FP49593 454 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 FPGSQ05932 587 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 DYRK1AQ13627 763 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 POLD3Q15054 466 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 GEN1Q17RS7 908 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 FAM209BQ5JX69 171 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 KLHDC7AQ5VTJ3 777 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 RD3Q7Z3Z2 195 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 GPR149Q86SP6 731 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 PPP1R3BQ86XI6 285 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 SUGP1Q8IWZ8 645 aaKnown RBP3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 SMAP1Q8IYB5 467 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 RNF152Q8N8N0 203 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 Q8NA96 180 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 ACRBPQ8NEB7 543 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 IL31RAQ8NI17 732 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 UBE2Q2Q8WVN8 375 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 ASB10Q8WXI3 467 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 LINC00476Q8WZB0 136 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 SNX19Q92543 992 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 PHKBQ93100 1093 aa3.56□□□□□ -1.84
HMGB1P9-201ENST00000429856 NACC2Q96BF6 587 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms