RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ZBTB8OSQ8IWT0 167 aa8.46□□□□□ -1.06
HPS4-205ENST00000429411 ABRAQ8N0Z2 381 aa8.46□□□□□ -1.06
HPS4-205ENST00000429411 TRAPPC12Q8WVT3 735 aa8.46□□□□□ -1.06
HPS4-205ENST00000429411 CKAP2Q8WWK9 683 aa8.46□□□□□ -1.06
HPS4-205ENST00000429411 CLEC4DQ8WXI8 215 aa8.46□□□□□ -1.06
HPS4-205ENST00000429411 FAF2Q96CS3 445 aa8.46□□□□□ -1.06
HPS4-205ENST00000429411 MPHOSPH6Q99547 160 aaKnown RBP8.46□□□□□ -1.06
HPS4-205ENST00000429411 GPATCH2LQ9NWQ4 482 aa8.46□□□□□ -1.06
HPS4-205ENST00000429411 COL4A5P29400 1685 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 C2orf71A6NGG8 1288 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 CST3P01034 146 aaPredicted RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 RBP3P10745 1247 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 POLR2BP30876 1174 aaKnown RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 CDH6P55285 790 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 WNT7BP56706 349 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 EIF3EP60228 445 aaKnown RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 XRCC4Q13426 336 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 PTK6Q13882 451 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 CCNG2Q16589 344 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 PREPLQ4J6C6 727 aaPredicted RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 RGMBQ6NW40 437 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 SLC39A4Q6P5W5 647 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 MTDHQ86UE4 582 aaKnown RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 PDCD7Q8N8D1 485 aaKnown RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 ASAP3Q8TDY4 903 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 CENPTQ96BT3 561 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 FAM111AQ96PZ2 611 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 GMLQ99445 158 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 MIS12Q9H081 205 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 NRBP2Q9NSY0 501 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 PIH1D1Q9NWS0 290 aaKnown RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 SEPT10Q9P0V9 454 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 XPO7Q9UIA9 1087 aaKnown RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 ENO4A6NNW6 628 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 M0QYV0 167 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 LPXNO60711 386 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 DNAJC8O75937 253 aaPredicted RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 FOXN2P32314 431 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 RASSF2P50749 326 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 STXBP2Q15833 593 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 TAF1BQ53T94 588 aaPredicted RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 SPOCD1Q6ZMY3 1216 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 SESTD1Q86VW0 696 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 TMEM130Q8N3G9 435 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 FBXO36Q8NEA4 188 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 CFAP61Q8NHU2 1237 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 TMC2Q8TDI7 906 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 SHCBP1LQ9BZQ2 653 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 AAASQ9NRG9 546 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 CISHQ9NSE2 258 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 IGSF5Q9NSI5 407 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 POLIQ9UNA4 740 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 MYO9BQ13459 2157 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 C5orf60A6NFR6 353 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 ARHGAP42A6NI28 874 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 H0YCG3 227 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 GYG2O15488 501 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 APRTP07741 180 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 PAEPP09466 180 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 MAPTP10636 758 aaKnown RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 GHRP10912 638 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 ESRRAP11474 423 aaPredicted RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 SAT1P21673 171 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 MUTP22033 750 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 HSD17B4P51659 736 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 YARSP54577 528 aaKnown RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 NCKAP1LP55160 1127 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 FSTL1Q12841 308 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 MAPK6Q16659 721 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 SLFN12LQ6IEE8 588 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 ECHDC2Q86YB7 292 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 RCOR2Q8IZ40 523 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 CCDC110Q8TBZ0 833 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 SPATA18Q8TC71 538 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 PPP1R13LQ8WUF5 828 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 PRPF31Q8WWY3 499 aaKnown RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 PSPC1Q8WXF1 523 aaKnown RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 SEC14L1Q92503 715 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 OPTNQ96CV9 577 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 DDX27Q96GQ7 796 aaKnown RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 MAGEB18Q96M61 343 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 SYT11Q9BT88 431 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 SLC38A10Q9HBR0 1119 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 APOBEC3GQ9HC16 384 aaKnown RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 KIAA1586Q9HCI6 787 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 RAB6BQ9NRW1 208 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 PPARGC1AQ9UBK2 798 aaKnown RBP8.45□□□□□ -1.06
HPS4-205ENST00000429411 TJP2Q9UDY2 1190 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 USH1CQ9Y6N9 552 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 ZNF536O15090 1300 aa8.45□□□□□ -1.06
HPS4-205ENST00000429411 I3L4J1 428 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 VWA5AO00534 786 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 CALB1P05937 261 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 RFC1P35251 1148 aaPredicted RBP8.44□□□□□ -1.06
HPS4-205ENST00000429411 STAT5BP51692 787 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 NOMO3P69849 1222 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 TMPRSS15P98073 1019 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 GCNT1Q02742 428 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 CENPCQ03188 943 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 KDSRQ06136 332 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms