RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 CD300LGQ6UXG3 332 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 MMS22LQ6ZRQ5 1243 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 ACOT1Q86TX2 421 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 GPR65Q8IYL9 337 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 THEM5Q8N1Q8 247 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 SCML4Q8N228 414 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 C3orf58Q8NDZ4 430 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.59□□□□□ -0.87
NR1I3-209ENST00000428574 KCTD13Q8WZ19 329 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 CD101Q93033 1021 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 CASD1Q96PB1 797 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 OSBPL9Q96SU4 736 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 NAP1L3Q99457 506 aaPredicted RBP9.59□□□□□ -0.87
NR1I3-209ENST00000428574 C11orf70Q9BRQ4 267 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 SELENOOQ9BVL4 669 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 COLEC11Q9BWP8 271 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 PPP1R12CQ9BZL4 782 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 OSGEPQ9NPF4 335 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 IP6K2Q9UHH9 426 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 COG5Q9UP83 839 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 INPP5FQ9Y2H2 1132 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 OR6C75A6NL08 312 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 PSTPIP1O43586 416 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 DGKIO75912 1065 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 FBXO21O94952 628 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 MYCP01106 439 aaPredicted RBP9.58□□□□□ -0.88
NR1I3-209ENST00000428574 GLI1P08151 1106 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 FGFR1P11362 822 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 RAG1P15918 1043 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 CTNNA1P35221 906 aaKnown RBP9.58□□□□□ -0.88
NR1I3-209ENST00000428574 CCL23P55773 120 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 TSPY1Q01534 308 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 PPIGQ13427 754 aaKnown RBP eCLIP9.58□□□□□ -0.88
NR1I3-209ENST00000428574 PPP2R5EQ16537 467 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 GOLGA7BQ2TAP0 167 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 CFAP221Q4G0U5 840 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 PPP1R26Q5T8A7 1209 aaPredicted RBP9.58□□□□□ -0.88
NR1I3-209ENST00000428574 FAM171BQ6P995 826 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 POLNQ7Z5Q5 900 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 TTC30AQ86WT1 665 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 XYLT1Q86Y38 959 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 PASD1Q8IV76 773 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 CMTR2Q8IYT2 770 aaKnown RBP9.58□□□□□ -0.88
NR1I3-209ENST00000428574 RASGEF1CQ8N431 466 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 FEZF2Q8TBJ5 459 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 MYCBPAPQ8TBZ2 947 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 ACTRT1Q8TDG2 376 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 RUBCNQ92622 972 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 TOP1MTQ969P6 601 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 SCLYQ96I15 445 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 FUBP3Q96I24 572 aaKnown RBP eCLIP9.58□□□□□ -0.88
NR1I3-209ENST00000428574 CEP295NLQ96MC4 621 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 SYT15Q9BQS2 421 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 TRIM62Q9BVG3 475 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 DUSP16Q9BY84 665 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 MCOLN1Q9GZU1 580 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 CSNK1G1Q9HCP0 422 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 ASNSD1Q9NWL6 643 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 DDX43Q9NXZ2 648 aaKnown RBP9.58□□□□□ -0.88
NR1I3-209ENST00000428574 ANAPC7Q9UJX3 599 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 ADAM28Q9UKQ2 775 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.58□□□□□ -0.88
NR1I3-209ENST00000428574 ALG6Q9Y672 507 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 SCN1AP35498 2009 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 TTC3P53804 2025 aa9.58□□□□□ -0.88
NR1I3-209ENST00000428574 TRIP11Q15643 1979 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 TSC2P49815 1807 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 TDRD15B5MCY1 1934 aaKnown RBP9.57□□□□□ -0.88
NR1I3-209ENST00000428574 CTAGE15A4D2H0 777 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 DPYSL4O14531 572 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 DDHD2O94830 711 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 FTCDO95954 541 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 ALDH2P05091 517 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 CFHP08603 1231 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 FAM200BP0CF97 657 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 CTAGE8P0CG41 777 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 KRT3P12035 628 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 NPR3P17342 541 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 PAFAH1B1P43034 410 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 PSMC1P62191 440 aaKnown RBP9.57□□□□□ -0.88
NR1I3-209ENST00000428574 YWHAHQ04917 246 aaPredicted RBP9.57□□□□□ -0.88
NR1I3-209ENST00000428574 NFE2Q16621 373 aaPredicted RBP9.57□□□□□ -0.88
NR1I3-209ENST00000428574 INTS6LQ5JSJ4 861 aaKnown RBP9.57□□□□□ -0.88
NR1I3-209ENST00000428574 OVOS1Q6IE37 1185 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 C4orf50Q6ZRC1 276 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 SLC26A9Q7LBE3 791 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 CTAGE6Q86UF2 777 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 OSTM1Q86WC4 334 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 ZNF280BQ86YH2 543 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 CREG2Q8IUH2 290 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 CTAGE4Q8IX94 777 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 DCP1BQ8IZD4 617 aaKnown RBP9.57□□□□□ -0.88
NR1I3-209ENST00000428574 FUKQ8N0W3 1084 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 C2orf15Q8WU43 125 aaKnown RBP9.57□□□□□ -0.88
NR1I3-209ENST00000428574 ZNF689Q96CS4 500 aaPredicted RBP9.57□□□□□ -0.88
NR1I3-209ENST00000428574 VWCEQ96DN2 955 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 SMARCD1Q96GM5 515 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 CPXM1Q96SM3 734 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 PKMYT1Q99640 499 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 SYNCQ9H7C4 482 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms