RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 FAM171A1Q5VUB5 890 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 FAM35AQ86V20 835 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 CEP57Q86XR8 500 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 CMTR2Q8IYT2 770 aaKnown RBP12.78□□□□□ -0.36
RFC4-206ENST00000427785 WDTC1Q8N5D0 677 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 SPATA18Q8TC71 538 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 MYLPFQ96A32 169 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 TRIM11Q96F44 468 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 NOX5Q96PH1 765 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 ALS2CR12Q96Q35 445 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 MED10Q9BTT4 135 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 NUP85Q9BW27 656 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 RHOBTB2Q9BYZ6 727 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 GPR62Q9BZJ7 368 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 DNAI2Q9GZS0 605 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 LHX5Q9H2C1 402 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 GOLPH3Q9H4A6 298 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 KRT82Q9NSB4 513 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 ADAM22Q9P0K1 906 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 CTTNBP2NLQ9P2B4 639 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 HESX1Q9UBX0 185 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 CDH9Q9ULB4 789 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 KIAA1257Q9ULG3 409 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 COG5Q9UP83 839 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 MYBPHLA2RUH7 354 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 TMEM110-MUSTN1A8MSY1 372 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 PIK3R2O00459 728 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 PALMO75781 387 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 GJB6O95452 261 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 ERBB2P04626 1255 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 FAM163BP0C2L3 166 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 MMP8P22894 467 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 GPC5P78333 572 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 C1QBPQ07021 282 aaKnown RBP12.77□□□□□ -0.37
RFC4-206ENST00000427785 PDE4CQ08493 712 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 PKDCCQ504Y2 493 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 VARS2Q5ST30 1063 aaKnown RBP12.77□□□□□ -0.37
RFC4-206ENST00000427785 LIN9Q5TKA1 542 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 FUKQ8N0W3 1084 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 COLGALT1Q8NBJ5 622 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 TPCN2Q8NHX9 752 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 SLC35G2Q8TBE7 412 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 ZNF564Q8TBZ8 553 aaPredicted RBP12.77□□□□□ -0.37
RFC4-206ENST00000427785 DPF3Q92784 378 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 ZNF558Q96NG5 402 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 CPXM1Q96SM3 734 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 LBHD1Q9BQE6 289 aaPredicted RBP12.77□□□□□ -0.37
RFC4-206ENST00000427785 VN1R3Q9BXE9 311 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 B3GNT5Q9BYG0 378 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 ZNF518BQ9C0D4 1074 aa12.77□□□□□ -0.37
RFC4-206ENST00000427785 CEP290O15078 2479 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 GOLGA8SH3BPF8 625 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 SYN3O14994 580 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 TRAPPC3O43617 180 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 FTCDO95954 541 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 ALDH2P05091 517 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 CALB1P05937 261 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 OR4Q2P0C623 313 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 MYBL1P10243 752 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 LAG3P18627 525 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 CASQ1P31415 396 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 GPD2P43304 727 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 ALDH7A1P49419 539 aaKnown RBP12.76□□□□□ -0.37
RFC4-206ENST00000427785 RABGGTBP53611 331 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 TSPY1Q01534 308 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 BST2Q10589 180 aaKnown RBP12.76□□□□□ -0.37
RFC4-206ENST00000427785 PPP1R2P3Q6NXS1 205 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 KCNT2Q6UVM3 1135 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 ERICH1Q86X53 443 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 RHOT2Q8IXI1 618 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 THEM5Q8N1Q8 247 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 TRIM58Q8NG06 486 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 IPO4Q8TEX9 1081 aaKnown RBP12.76□□□□□ -0.37
RFC4-206ENST00000427785 HERVK_113Q902F9 699 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 PCED1BQ96HM7 432 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 BTBD6Q96KE9 485 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 PKMYT1Q99640 499 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 HNRNPABQ99729 332 aaKnown RBP12.76□□□□□ -0.37
RFC4-206ENST00000427785 SYNCQ9H7C4 482 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 AVENQ9NQS1 362 aaPredicted RBP12.76□□□□□ -0.37
RFC4-206ENST00000427785 ST7Q9NRC1 585 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 TMLHEQ9NVH6 421 aa12.76□□□□□ -0.37
RFC4-206ENST00000427785 E5RJQ4 531 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 NCK2O43639 380 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 BUB1BO60566 1050 aaPredicted RBP12.75□□□□□ -0.37
RFC4-206ENST00000427785 GJB5O95377 273 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 FAM200BP0CF97 657 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 SETSIPP0DME0 302 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 FGFR3P22607 806 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 COL4A4P53420 1690 aaPredicted RBP12.75□□□□□ -0.37
RFC4-206ENST00000427785 CACNA2D1P54289 1103 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 ELAVL2Q12926 359 aaKnown RBP12.75□□□□□ -0.37
RFC4-206ENST00000427785 IFI16Q16666 785 aaKnown RBP12.75□□□□□ -0.37
RFC4-206ENST00000427785 CTXN3Q4LDR2 81 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 RTP2Q5QGT7 225 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 ZNF280DQ6N043 979 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 DNAJC24Q6P3W2 148 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.75□□□□□ -0.37
RFC4-206ENST00000427785 PAQR9Q6ZVX9 377 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 TAS1R1Q7RTX1 841 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms