RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 PLCD3Q8N3E9 789 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 FAM200AQ8TCP9 573 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 NT5C1BQ96P26 610 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 ARID3AQ99856 593 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 LPIN3Q9BQK8 851 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 ELOVL4Q9GZR5 314 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 DNAI2Q9GZS0 605 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 KCNJ18B7U540 433 aa26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 TBXAS1P24557 533 aaPredicted RBP26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 EEF1GP26641 437 aaKnown RBP26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 GBP2P32456 591 aaPredicted RBP26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 LRMPQ12912 555 aa26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 KCNJ12Q14500 433 aa26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 SLC5A9Q2M3M2 681 aa26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 CYP4A22Q5TCH4 519 aa26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 ZDHHC14Q8IZN3 488 aa26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 CRYBG2Q8N1P7 616 aa26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 LMO3Q8TAP4 145 aa26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 MYADMQ96S97 322 aa26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 NT5C1AQ9BXI3 368 aa26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 NAT10Q9H0A0 1025 aaKnown RBP26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 CISHQ9NSE2 258 aa26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 GCNT4Q9P109 453 aa26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 MRPS23Q9Y3D9 190 aaKnown RBP26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 DOCK8Q8NF50 2099 aa26.77■■□□□ 1.88
HERPUD2-205ENST00000427455 ATP8B3O60423 1300 aa26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 ZNF197O14709 1029 aa26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 BDNFP23560 247 aa26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 YWHAEP62258 255 aaKnown RBP26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 ORC1Q13415 861 aa26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 PRSS36Q5K4E3 855 aa26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 DNAJB7Q7Z6W7 309 aaPredicted RBP26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 TMC8Q8IU68 726 aa26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 HS6ST3Q8IZP7 471 aa26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 EHBP1Q8NDI1 1231 aa26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 ITFG1Q8TB96 612 aa26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 TWNKQ96RR1 684 aa26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 TUBGCP2Q9BSJ2 902 aa26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 INTS2Q9H0H0 1204 aaKnown RBP26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 ZFP37Q9Y6Q3 630 aaPredicted RBP26.76■■□□□ 1.87
HERPUD2-205ENST00000427455 PRKCSHP14314 528 aaPredicted RBP26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 GPR15P49685 360 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 TAF12Q16514 161 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 DDR2Q16832 855 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 ANO6Q4KMQ2 910 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 TCP11X2Q5H9J9 407 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 CDKAL1Q5VV42 579 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 SCN4BQ8IWT1 228 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 WHAMMQ8TF30 809 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 GIPC2Q8TF65 315 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 LRRC3Q9BY71 257 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 B3GNT5Q9BYG0 378 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 ZNF518BQ9C0D4 1074 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 EPS15L1Q9UBC2 864 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 CDH7Q9ULB5 785 aa26.75■■□□□ 1.87
HERPUD2-205ENST00000427455 GTPBP10A4D1E9 387 aaKnown RBP26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 TNFRSF10AO00220 468 aa26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 TRIM66O15016 1216 aa26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 MICAL2O94851 1124 aa26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 FGF19O95750 216 aa26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 MYL4P12829 197 aa26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 CCR2P41597 374 aa26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 FAM35AQ86V20 835 aa26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 RNF135Q8IUD6 432 aa26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 NPAS3Q8IXF0 933 aa26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 PPM1KQ8N3J5 372 aa26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 GPR152Q8TDT2 470 aa26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 FGF13Q92913 245 aa26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 CEP295NLQ96MC4 621 aa26.74■■□□□ 1.87
HERPUD2-205ENST00000427455 SYCE3A1L190 88 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 CSH1P0DML2 217 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 CSH2P0DML3 217 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 CEBPBP17676 345 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 ANXA13P27216 316 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 GRIK1P39086 918 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 VWA3BQ502W6 1294 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 SDHAF4Q5VUM1 108 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 GBP6Q6ZN66 633 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 ING5Q8WYH8 240 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 TCEAL4Q96EI5 215 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 BPIFA3Q9BQP9 254 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 MED10Q9BTT4 135 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 FUCA2Q9BTY2 467 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 NDST4Q9H3R1 872 aa26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 ZNF334Q9HCZ1 680 aaPredicted RBP26.73■■□□□ 1.87
HERPUD2-205ENST00000427455 CLDN5O00501 218 aa26.72■■□□□ 1.87
HERPUD2-205ENST00000427455 LAMP2P13473 410 aa26.72■■□□□ 1.87
HERPUD2-205ENST00000427455 CCDC130P13994 396 aa26.72■■□□□ 1.87
HERPUD2-205ENST00000427455 GCNT1Q02742 428 aa26.72■■□□□ 1.87
HERPUD2-205ENST00000427455 MIIPQ5JXC2 388 aa26.72■■□□□ 1.87
HERPUD2-205ENST00000427455 FUKQ8N0W3 1084 aa26.72■■□□□ 1.87
HERPUD2-205ENST00000427455 C12orf29Q8N999 325 aa26.72■■□□□ 1.87
HERPUD2-205ENST00000427455 SMARCD1Q96GM5 515 aa26.72■■□□□ 1.87
HERPUD2-205ENST00000427455 SPATA17Q96L03 361 aa26.72■■□□□ 1.87
HERPUD2-205ENST00000427455 C8orf48Q96LL4 319 aa26.72■■□□□ 1.87
HERPUD2-205ENST00000427455 FAM49BQ9NUQ9 324 aa26.72■■□□□ 1.87
HERPUD2-205ENST00000427455 FANCLQ9NW38 375 aa26.72■■□□□ 1.87
HERPUD2-205ENST00000427455 NOL4O94818 638 aa26.71■■□□□ 1.87
HERPUD2-205ENST00000427455 EXOC3L4Q17RC7 722 aa26.71■■□□□ 1.87
HERPUD2-205ENST00000427455 ZNF394Q53GI3 561 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms