RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 RAET1EQ8TD07 263 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 MAGEC3Q8TD91 643 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 KIF12Q96FN5 646 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 TMEM176AQ96HP8 235 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 OSMRQ99650 979 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.02□□□□□ -0.979e-7■□□□□ 9.8
SH3D19-204ENST00000427414 TRIM6Q9C030 488 aaPredicted RBP9.02□□□□□ -0.97
SH3D19-204ENST00000427414 ARHGAP39Q9C0H5 1083 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 PCDHA3Q9Y5H8 950 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 CDY2AQ9Y6F7 541 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 PSTPIP1O43586 416 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 BUB1BO60566 1050 aaPredicted RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 AOC2O75106 756 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 HARSP12081 509 aaKnown RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 XRCC4Q13426 336 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 GDF6Q6KF10 455 aaPredicted RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 LCLAT1Q6UWP7 414 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 DAAM2Q86T65 1068 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 CRYBG2Q8N1P7 616 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 ZNF564Q8TBZ8 553 aaPredicted RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 UBLCP1Q8WVY7 318 aaPredicted RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 RAPGEF5Q92565 580 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 ZNF653Q96CK0 615 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 LRRC45Q96CN5 670 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 TBC1D31Q96DN5 1066 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 DDX27Q96GQ7 796 aaKnown RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 FAM49AQ9H0Q0 323 aaPredicted RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 SLITRK6Q9H5Y7 841 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 SLC24A3Q9HC58 644 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 CTTNBP2NLQ9P2B4 639 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 CNOT8Q9UFF9 292 aaKnown RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 IP6K2Q9UHH9 426 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 BAIAP2L1Q9UHR4 511 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 NOVA2Q9UNW9 492 aaKnown RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 TCRBV5S1A1TA0A578 114 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 BHMG1C9JSJ3 638 aaPredicted RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 PGRMC1O00264 195 aaKnown RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 PPP1R12AO14974 1030 aaPredicted RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 DDX3YO15523 660 aaKnown RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 THAP12O43422 761 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 ITGB3P05106 788 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 GBP1P32455 592 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 PTPN7P35236 360 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 RPL34P49207 117 aaKnown RBP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 ACLYP53396 1101 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 RAD23BP54727 409 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 PPP2R2AP63151 447 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 ZNF844Q08AG5 666 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 ITGA7Q13683 1181 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 VSIG1Q86XK7 387 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 DDX42Q86XP3 938 aaKnown RBP eCLIP9.01□□□□□ -0.97
SH3D19-204ENST00000427414 TMEM86AQ8N2M4 240 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 NT5C1AQ9BXI3 368 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 FTHL17Q9BXU8 183 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 HOMER3Q9NSC5 361 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 ALG6Q9Y672 507 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 UMODL1Q5DID0 1318 aa9.01□□□□□ -0.97
SH3D19-204ENST00000427414 MYADML2A6NDP7 307 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 H0YGN5 161 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 EOMESO95936 686 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 WARSP23381 471 aaKnown RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 COPS2P61201 443 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 PIGHQ14442 188 aaPredicted RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 PPP1R7Q15435 360 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 UAP1Q16222 522 aaPredicted RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 LACTB2Q53H82 288 aaPredicted RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 C9orf57Q5W0N0 161 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 HIBCHQ6NVY1 386 aaPredicted RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 CEP120Q8N960 986 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 SMG8Q8ND04 991 aaKnown RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 GADD45GIP1Q8TAE8 222 aaPredicted RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 GLT1D1Q96MS3 346 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 PPP1R10Q96QC0 940 aaKnown RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 NUP85Q9BW27 656 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 CDHR5Q9HBB8 845 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 SEPT11Q9NVA2 429 aaKnown RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 SNTG2Q9NY99 539 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 TAS2R14Q9NYV8 317 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 AGAP1Q9UPQ3 857 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 PIN4Q9Y237 131 aaKnown RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 EFR3BQ9Y2G0 817 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 IPPQ9Y573 584 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 NFS1Q9Y697 457 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 MYH10P35580 1976 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 SMIM28A0A1B0GU29 152 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 RECQL4O94761 1208 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 PROSCO94903 275 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 CCND3P30281 292 aaPredicted RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 MAGOHP61326 146 aaKnown RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 WDR72Q3MJ13 1102 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 SGO2Q562F6 1265 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 FBXO47Q5MNV8 452 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 PPP1R15BQ5SWA1 713 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 LMBRD2Q68DH5 695 aaPredicted RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 LHX8Q68G74 356 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 SPOPLQ6IQ16 392 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 TMEM192Q8IY95 271 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 SLC4A11Q8NBS3 891 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 FEZF2Q8TBJ5 459 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms