RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 KALRNO60229 2985 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 FDPSP14324 419 aaKnown RBP15.33■□□□□ 0.04
HDAC6-206ENST00000426196 HMGA1P17096 107 aaKnown RBP15.33■□□□□ 0.04
HDAC6-206ENST00000426196 PTGER3P43115 390 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 FOSBP53539 338 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 SMTNP53814 917 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 GFPT1Q06210 699 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-206ENST00000426196 USP4Q13107 963 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 ORC2Q13416 577 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-206ENST00000426196 ZNF77Q15935 545 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 KYAT1Q16773 422 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 DUOXA1Q1HG43 343 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 EML3Q32P44 896 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 THEM5Q8N1Q8 247 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 CCDC33Q8N5R6 958 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 CEP76Q8TAP6 659 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 RLN3Q8WXF3 142 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 FNBP1Q96RU3 617 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 TMEM206Q9H813 350 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 TRPC7Q9HCX4 862 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 BCCIPQ9P287 314 aaKnown RBP eCLIP15.33■□□□□ 0.04
HDAC6-206ENST00000426196 UXTQ9UBK9 157 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-206ENST00000426196 MBD1Q9UIS9 605 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-206ENST00000426196 KCNG1Q9UIX4 513 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 SLC6A14Q9UN76 642 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 DNM3Q9UQ16 869 aa15.33■□□□□ 0.04
HDAC6-206ENST00000426196 ATXN2Q99700 1313 aaKnown RBP15.33■□□□□ 0.04
HDAC6-206ENST00000426196 TRAV19A0A0A6YYK7 116 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 LACTBL1A8MY62 500 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 NFATC1O95644 943 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 CKMP06732 381 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 CSH1P0DML2 217 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 CSH2P0DML3 217 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 FAM193AP78312 1265 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 MRPS21P82921 87 aaKnown RBP15.32■□□□□ 0.04
HDAC6-206ENST00000426196 MAPK7Q13164 816 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 SPATA1Q5VX52 437 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 RABEPKQ7Z6M1 372 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 BICD1Q96G01 975 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 RUSC1Q9BVN2 902 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 TIPINQ9BVW5 301 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 RPF1Q9H9Y2 349 aaKnown RBP15.32■□□□□ 0.04
HDAC6-206ENST00000426196 POLMQ9NP87 494 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-206ENST00000426196 LRWD1Q9UFC0 647 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 PILRBQ9UKJ0 227 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 PCDHB5Q9Y5E4 795 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 STK24Q9Y6E0 443 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 PCDH15Q96QU1 1955 aa15.32■□□□□ 0.04
HDAC6-206ENST00000426196 MYOFQ9NZM1 2061 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 K7EQS6 105 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 USP17L7P0C7H9 530 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 MAPTP10636 758 aaKnown RBP15.31■□□□□ 0.04
HDAC6-206ENST00000426196 ITPKAP23677 461 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 TNFSF9P41273 254 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 FXR2P51116 673 aaKnown RBP eCLIP15.31■□□□□ 0.04
HDAC6-206ENST00000426196 SAFBQ15424 915 aaKnown RBP eCLIP15.31■□□□□ 0.04
HDAC6-206ENST00000426196 ZNF174Q15697 407 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 PEAR1Q5VY43 1037 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-206ENST00000426196 CENPQQ7L2Z9 268 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-206ENST00000426196 EFCAB13Q8IY85 973 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 DCP1BQ8IZD4 617 aaKnown RBP15.31■□□□□ 0.04
HDAC6-206ENST00000426196 MINDY1Q8N5J2 469 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 TMEM161BQ8NDZ6 487 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 SNX29Q8TEQ0 813 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 SPIRE2Q8WWL2 714 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 NTPCRQ9BSD7 190 aaKnown RBP15.31■□□□□ 0.04
HDAC6-206ENST00000426196 PCDHB9Q9Y5E1 797 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 PTPRBP23467 1997 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 SHROOM3Q8TF72 1996 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 NAV2Q8IVL1 2488 aa15.31■□□□□ 0.04
HDAC6-206ENST00000426196 SFI1A8K8P3 1242 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 PRPF40AO75400 957 aaKnown RBP15.3■□□□□ 0.04
HDAC6-206ENST00000426196 SERPINF2P08697 491 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 ENOX2Q16206 610 aaKnown RBP15.3■□□□□ 0.04
HDAC6-206ENST00000426196 HSF5Q4G112 596 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-206ENST00000426196 C9orf57Q5W0N0 161 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 JADE1Q6IE81 842 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 RINT1Q6NUQ1 792 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 TMEM92Q6UXU6 159 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 LRRTM3Q86VH5 581 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 STKLD1Q8NE28 680 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 GLIS3Q8NEA6 775 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 HNRNPLLQ8WVV9 542 aaKnown RBP15.3■□□□□ 0.04
HDAC6-206ENST00000426196 ADAMTS14Q8WXS8 1223 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 FAM212AQ96EL1 285 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 LRIG1Q96JA1 1093 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 BBC3Q96PG8 261 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-206ENST00000426196 RAB34Q9BZG1 259 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 HAPLN2Q9GZV7 340 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 FSCN3Q9NQT6 498 aa15.3■□□□□ 0.04
HDAC6-206ENST00000426196 E9PMD0 336 aa15.29■□□□□ 0.04
HDAC6-206ENST00000426196 PIRO00625 290 aa15.29■□□□□ 0.04
HDAC6-206ENST00000426196 CYB561D2O14569 222 aa15.29■□□□□ 0.04
HDAC6-206ENST00000426196 AP5Z1O43299 807 aa15.29■□□□□ 0.04
HDAC6-206ENST00000426196 TADA3O75528 432 aa15.29■□□□□ 0.04
HDAC6-206ENST00000426196 SYPP08247 313 aa15.29■□□□□ 0.04
HDAC6-206ENST00000426196 PLS3P13797 630 aa15.29■□□□□ 0.04
HDAC6-206ENST00000426196 OPRD1P41143 372 aa15.29■□□□□ 0.04
HDAC6-206ENST00000426196 GPR15P49685 360 aa15.29■□□□□ 0.04
HDAC6-206ENST00000426196 TSPY1Q01534 308 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms