RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 RRAGAQ7L523 313 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 PRICKLE2Q7Z3G6 844 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 TMC7Q7Z402 723 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 USP37Q86T82 979 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 RBM23Q86U06 439 aaKnown RBP6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 GLYCTKQ8IVS8 523 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 UBR7Q8N806 425 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 OR10T2Q8NGX3 314 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 FEZF2Q8TBJ5 459 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 MRPL38Q96DV4 380 aaKnown RBP6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 KLHL5Q96PQ7 755 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 TWNKQ96RR1 684 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 MMS19Q96T76 1030 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 CDX2Q99626 313 aaPredicted RBP6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 TCF25Q9BQ70 676 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 CLSTN3Q9BQT9 956 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 VRTNQ9H8Y1 702 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 RXFP1Q9HBX9 757 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 ENTPD7Q9NQZ7 604 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 TLR9Q9NR96 1032 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 MTMR10Q9NXD2 777 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 GCNT4Q9P109 453 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 HMGXB4Q9UGU5 601 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 PUF60Q9UHX1 559 aaKnown RBP6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 MTCH2Q9Y6C9 303 aa6.12□□□□□ -1.43
HERPUD2-204ENST00000426180 PLXNA4Q9HCM2 1894 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 A0A1B0GTH6 734 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 GOLGA6L19H0YKK7 550 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 GABRDO14764 452 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 SYN3O14994 580 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 P4HA2O15460 535 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 TEX28O15482 410 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 LINC01565O15544 149 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 TRAPPC3O43617 180 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 HUS1O60921 280 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 N4BP1O75113 896 aaKnown RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 CLASP2O75122 1294 aaKnown RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 ATP2C2O75185 946 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 AP1G2O75843 785 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 NOL4O94818 638 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 OAZ2O95190 189 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 VNN2O95498 520 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 URODP06132 367 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 CNPP09543 421 aaKnown RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 PDGFRBP09619 1106 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 SPATA31D3P0C874 917 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 ODC1P11926 461 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 CD58P19256 250 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 TYMPP19971 482 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 ACO1P21399 889 aaKnown RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 WARSP23381 471 aaKnown RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 ARPP19P56211 112 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 TNNC1P63316 161 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 UBXN1Q04323 297 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 ELAVL2Q12926 359 aaKnown RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 SMC1AQ14683 1233 aaKnown RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 SYCP1Q15431 976 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 EXOC3L4Q17RC7 722 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 CTXN3Q4LDR2 81 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 TCEAL5Q5H9L2 206 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 ZNF667Q5HYK9 610 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 OVOS1Q6IE37 1185 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 KIAA1841Q6NSI8 718 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 FOXR1Q6PIV2 292 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 TRIM65Q6PJ69 517 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 GBP6Q6ZN66 633 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 SPATA31D4Q6ZUB0 917 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 LRRTM3Q86VH5 581 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 ADGRF2Q8IZF7 708 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 MICALL1Q8N3F8 863 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 TOP6BLQ8N6T0 577 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 MRPL43Q8N983 215 aaKnown RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 KDF1Q8NAX2 398 aaPredicted RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 APPL2Q8NEU8 664 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 VN1R2Q8NFZ6 395 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 MICAL1Q8TDZ2 1067 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 PIK3R5Q8WYR1 880 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 TAF4BQ92750 862 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 KREMEN1Q96MU8 473 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 LSM14BQ9BX40 385 aaKnown RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 BCO2Q9BYV7 579 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 ELOVL4Q9GZR5 314 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 NIF3L1Q9GZT8 377 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 LMAN2LQ9H0V9 348 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 DPEP3Q9H4B8 488 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 IGFLR1Q9H665 355 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 MRPL17Q9NRX2 175 aaKnown RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 TMLHEQ9NVH6 421 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 CUEDC1Q9NWM3 386 aaPredicted RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 IFNKQ9P0W0 207 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 MTRRQ9UBK8 725 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 FBXL5Q9UKA1 691 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 SIK3Q9Y2K2 1263 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 R3HCC1Q9Y3T6 440 aaKnown RBP6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 CDY1Q9Y6F8 540 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 CITO14578 2027 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 TRIP11Q15643 1979 aa6.11□□□□□ -1.43
HERPUD2-204ENST00000426180 TDRD15B5MCY1 1934 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms