RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 CYP4A22Q5TCH4 519 aa11.26□□□□□ -0.61
CUX1-205ENST00000425244 DNAJC24Q6P3W2 148 aa11.26□□□□□ -0.61
CUX1-205ENST00000425244 CDR2LQ86X02 465 aaPredicted RBP11.26□□□□□ -0.61
CUX1-205ENST00000425244 EXD1Q8NHP7 514 aa11.26□□□□□ -0.61
CUX1-205ENST00000425244 SERPINB12Q96P63 405 aa11.26□□□□□ -0.61
CUX1-205ENST00000425244 AP5M1Q9H0R1 490 aa11.26□□□□□ -0.61
CUX1-205ENST00000425244 IP6K2Q9UHH9 426 aa11.26□□□□□ -0.61
CUX1-205ENST00000425244 GNEQ9Y223 722 aaKnown RBP11.26□□□□□ -0.61
CUX1-205ENST00000425244 CCT8L1PA6NM43 557 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 PIGRP01833 764 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 ETS1P14921 441 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 BRAFP15056 766 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 SLC26A2P50443 739 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 PLCB3Q01970 1234 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 CAV1Q03135 178 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 PTP4A2Q12974 167 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 TRPC3Q13507 836 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 ZKSCAN8Q15776 578 aaPredicted RBP11.25□□□□□ -0.61
CUX1-205ENST00000425244 MFSD7Q6UXD7 560 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 SRRM1Q8IYB3 904 aaKnown RBP11.25□□□□□ -0.61
CUX1-205ENST00000425244 GLIS1Q8NBF1 620 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 TRPV1Q8NER1 839 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 CCT6BQ92526 530 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 NSRP1Q9H0G5 558 aaKnown RBP11.25□□□□□ -0.61
CUX1-205ENST00000425244 FGFR1OP2Q9NVK5 253 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 DNPEPQ9ULA0 475 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 MGAMO43451 1857 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 GOLGA8SH3BPF8 625 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 INO80B-WBP1J3KQ70 363 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 MMP8P22894 467 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 ATP5DP30049 168 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 ZNF568Q3ZCX4 644 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 FAM133BQ5BKY9 247 aaKnown RBP11.25□□□□□ -0.61
CUX1-205ENST00000425244 TNFAIP8L3Q5GJ75 292 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 THNSL1Q8IYQ7 743 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 CYP4X1Q8N118 509 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 MRRFQ96E11 262 aaKnown RBP11.25□□□□□ -0.61
CUX1-205ENST00000425244 VCPIP1Q96JH7 1222 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 RBM15Q96T37 977 aaKnown RBP eCLIP11.25□□□□□ -0.611e-11■■■■□ 20.4
CUX1-205ENST00000425244 INO80BQ9C086 356 aaPredicted RBP11.25□□□□□ -0.61
CUX1-205ENST00000425244 FAM49AQ9H0Q0 323 aaPredicted RBP11.25□□□□□ -0.61
CUX1-205ENST00000425244 CISHQ9NSE2 258 aa11.25□□□□□ -0.61
CUX1-205ENST00000425244 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.25□□□□□ -0.61
CUX1-205ENST00000425244 LRRD1A4D1F6 860 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 MYADML2A6NDP7 307 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 ASAP2O43150 1006 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 ASS1P00966 412 aaKnown RBP11.24□□□□□ -0.61
CUX1-205ENST00000425244 IFNB1P01574 187 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 DYNLT1P63172 113 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 TMED2Q15363 201 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 GNASQ5JWF2 1037 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 MFSD14CQ5VZR4 134 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 TXNRD3NBQ6F5E7 133 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 VSTM1Q6UX27 236 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 BRSK2Q8IWQ3 736 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 EMID1Q96A84 441 aaPredicted RBP11.24□□□□□ -0.61
CUX1-205ENST00000425244 PAIP2Q9BPZ3 127 aaKnown RBP11.24□□□□□ -0.61
CUX1-205ENST00000425244 MRPL4Q9BYD3 311 aaKnown RBP11.24□□□□□ -0.61
CUX1-205ENST00000425244 SAYSD1Q9NPB0 183 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 KLC4Q9NSK0 619 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 NXF1Q9UBU9 619 aaKnown RBP11.24□□□□□ -0.61
CUX1-205ENST00000425244 HGSO14964 777 aaPredicted RBP11.24□□□□□ -0.61
CUX1-205ENST00000425244 AKR1A1P14550 325 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 CD19P15391 556 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 ARSEP51690 589 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 OGDHQ02218 1023 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 GPS1Q13098 491 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 GRIK4Q16099 956 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 NUGGCQ68CJ6 796 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 PIGWQ7Z7B1 504 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 BBOF1Q8ND07 529 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 RBM41Q96IZ5 413 aaKnown RBP11.24□□□□□ -0.61
CUX1-205ENST00000425244 SLITRK1Q96PX8 696 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 NEU2Q9Y3R4 380 aa11.24□□□□□ -0.61
CUX1-205ENST00000425244 TMEM191CA6NGB0 347 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 LIASO43766 372 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 TJP3O95049 919 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 C22orf31O95567 290 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 PRKCBP05771 671 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 CALB1P05937 261 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 KRT19P08727 400 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 TMEM191BP0C7N4 346 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 CACNB2Q08289 660 aaPredicted RBP11.23□□□□□ -0.61
CUX1-205ENST00000425244 ZNF252P-AS1Q0IIN9 211 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 ORC1Q13415 861 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 MPP2Q14168 576 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 FSCN1Q16658 493 aaKnown RBP11.23□□□□□ -0.61
CUX1-205ENST00000425244 SWT1Q5T5J6 900 aaKnown RBP11.23□□□□□ -0.61
CUX1-205ENST00000425244 IER5Q5VY09 327 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 SUGP1Q8IWZ8 645 aaKnown RBP11.23□□□□□ -0.61
CUX1-205ENST00000425244 RCOR2Q8IZ40 523 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 TAB3Q8N5C8 712 aaPredicted RBP11.23□□□□□ -0.61
CUX1-205ENST00000425244 TMEM35BQ8NCS4 154 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 CCDC77Q9BR77 488 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 NIF3L1Q9GZT8 377 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 KDM4CQ9H3R0 1056 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 TMEM134Q9H6X4 195 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 NAALADL1Q9UQQ1 740 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 A6NJR5 290 aa11.23□□□□□ -0.61
CUX1-205ENST00000425244 TOM1L1O75674 476 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms