RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 NDRG1Q92597 394 aaKnown RBP14.26□□□□□ -0.13
PRPF39-202ENST00000424478 IQCDQ96DY2 449 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 ST7Q9NRC1 585 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 VCANP13611 3396 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 EFEMP2O95967 443 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 SOD2P04179 222 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 LHX1P48742 406 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 RBM10P98175 930 aaKnown RBP14.26□□□□□ -0.13
PRPF39-202ENST00000424478 CAMK1Q14012 370 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 INTS6LQ5JSJ4 861 aaKnown RBP14.26□□□□□ -0.13
PRPF39-202ENST00000424478 CCDC122Q5T0U0 273 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 TMTC1Q8IUR5 882 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 TCF25Q9BQ70 676 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 NUCKS1Q9H1E3 243 aaKnown RBP14.26□□□□□ -0.13
PRPF39-202ENST00000424478 PRRC2BQ5JSZ5 2229 aaKnown RBP14.26□□□□□ -0.13
PRPF39-202ENST00000424478 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.26□□□□□ -0.13
PRPF39-202ENST00000424478 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.26□□□□□ -0.13
PRPF39-202ENST00000424478 MAP3K7CLP57077 242 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 RBM23Q86U06 439 aaKnown RBP14.26□□□□□ -0.13
PRPF39-202ENST00000424478 SECISBP2LQ93073 1101 aaKnown RBP14.26□□□□□ -0.13
PRPF39-202ENST00000424478 FAM161BQ96MY7 647 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 CLSTN3Q9BQT9 956 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 KRT82Q9NSB4 513 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.26□□□□□ -0.13
PRPF39-202ENST00000424478 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.25□□□□□ -0.13
PRPF39-202ENST00000424478 PER2O15055 1255 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 OAZ2O95190 189 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 FECHP22830 423 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 GLUD2P49448 558 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 PDE4CQ08493 712 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 PTPROQ16827 1216 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.25□□□□□ -0.13
PRPF39-202ENST00000424478 RNF168Q8IYW5 571 aaPredicted RBP14.25□□□□□ -0.13
PRPF39-202ENST00000424478 THEM5Q8N1Q8 247 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 FBXO22Q8NEZ5 403 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 ENTPD7Q9NQZ7 604 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 AAASQ9NRG9 546 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 CHST7Q9NS84 486 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 NAGPAQ9UK23 515 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 WDR27A2RRH5 827 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 VNN2O95498 520 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 TYMPP19971 482 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 KRT17Q04695 432 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 ALKBH5Q6P6C2 394 aaKnown RBP14.25□□□□□ -0.13
PRPF39-202ENST00000424478 UNC93AQ86WB7 457 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 CRYBG2Q8N1P7 616 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 SPPL3Q8TCT6 385 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 FAM81BQ96LP2 452 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 C11orf70Q9BRQ4 267 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 SLC28A3Q9HAS3 691 aa14.25□□□□□ -0.13
PRPF39-202ENST00000424478 SYN3O14994 580 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 URODP06132 367 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 PAEPP09466 180 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 VDRP11473 427 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 MRPL58Q14197 206 aaKnown RBP14.24□□□□□ -0.13
PRPF39-202ENST00000424478 DDR2Q16832 855 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 ZNF280DQ6N043 979 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 DDX53Q86TM3 631 aaKnown RBP14.24□□□□□ -0.13
PRPF39-202ENST00000424478 TNIP3Q96KP6 325 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 ACBD6Q9BR61 282 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 LACRTQ9GZZ8 138 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 LZTFL1Q9NQ48 299 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 PCDHA11Q9Y5I1 949 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 DOCK6Q96HP0 2047 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 GABBR2O75899 941 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 CXCL14O95715 111 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 PCSK1P29120 753 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 TSPY1Q01534 308 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 ROR1Q01973 937 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 SLC18A3Q16572 532 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 PMF1Q6P1K2 205 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 MMS22LQ6ZRQ5 1243 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 GPRIN1Q7Z2K8 1008 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 FAM35AQ86V20 835 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 SCN4BQ8IWT1 228 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 MYCBPAPQ8TBZ2 947 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 PIWIL1Q96J94 861 aaKnown RBP14.24□□□□□ -0.13
PRPF39-202ENST00000424478 CPXM1Q96SM3 734 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 PKMYT1Q99640 499 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 MYO1AQ9UBC5 1043 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 DSEQ9UL01 958 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 CDH9Q9ULB4 789 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 TEX28O15482 410 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 ARHGAP6O43182 974 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 AP1G2O75843 785 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 FTLP02792 175 aaPredicted RBP14.24□□□□□ -0.13
PRPF39-202ENST00000424478 CNPP09543 421 aaKnown RBP14.24□□□□□ -0.13
PRPF39-202ENST00000424478 NOMO3P69849 1222 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 ADCY1Q08828 1119 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 DUSP4Q13115 394 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 MAPK8IP2Q13387 824 aaPredicted RBP14.24□□□□□ -0.13
PRPF39-202ENST00000424478 PTPN14Q15678 1187 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 CLEC4CQ8WTT0 213 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 TGS1Q96RS0 853 aaKnown RBP14.24□□□□□ -0.13
PRPF39-202ENST00000424478 IRX2Q9BZI1 471 aaPredicted RBP14.24□□□□□ -0.13
PRPF39-202ENST00000424478 ZBP1Q9H171 429 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 ADGRG1Q9Y653 693 aa14.24□□□□□ -0.13
PRPF39-202ENST00000424478 PPM1AP35813 382 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 ARHGEF26Q96DR7 871 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 SEPT5Q99719 369 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms