RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 TAF4O00268 1085 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 KHNYNO15037 678 aaKnown RBP16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 NOL4O94818 638 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 NFICP08651 508 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 PFKLP17858 780 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 PNPLA4P41247 253 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 RPL10AP62906 217 aaKnown RBP16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 GTF2BQ00403 316 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 RAD51AP2Q09MP3 1159 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 NR1H3Q13133 447 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 MTF1Q14872 753 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 USP39Q53GS9 565 aaKnown RBP16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 RILPL1Q5EBL4 403 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 TCEAL6Q6IPX3 200 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 SLC39A4Q6P5W5 647 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 CCDC83Q8IWF9 413 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 FAM184AQ8NB25 1140 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 GIPC2Q8TF65 315 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 EZH1Q92800 747 aaPredicted RBP16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 TCEAL3Q969E4 200 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 CNOT6LQ96LI5 555 aaKnown RBP16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 ST6GALNAC4Q9H4F1 302 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 PARVGQ9HBI0 331 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 GON4LQ3T8J9 2241 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 AKAP13Q12802 2813 aa16.78■□□□□ 0.28
RPUSD3-204ENST00000424438 TNRC6BQ9UPQ9 1833 aaKnown RBP16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 CDX4O14627 284 aaPredicted RBP16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 USP17L7P0C7H9 530 aa16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 DPP6P42658 865 aa16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 TSPY1Q01534 308 aa16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 SV2CQ496J9 727 aa16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 SPDYCQ5MJ68 293 aa16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 WSCD1Q658N2 575 aa16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 TXNDC8Q6A555 127 aa16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 SLFN12LQ6IEE8 588 aa16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 AK8Q96MA6 479 aa16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 CEP295NLQ96MC4 621 aa16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 ZNF560Q96MR9 790 aa16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 ACBD6Q9BR61 282 aa16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 REEP2Q9BRK0 252 aa16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 PYM1Q9BRP8 204 aaKnown RBP16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 ABI2Q9NYB9 513 aaPredicted RBP16.77■□□□□ 0.28
RPUSD3-204ENST00000424438 KPNA7A9QM74 516 aa16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 UPK3BL1B0FP48 263 aa16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 UPK3BL2E5RIL1 263 aa16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 TADA3O75528 432 aa16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 TOP3BO95985 862 aaKnown RBP16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 NMT1P30419 496 aaKnown RBP16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 PDE6CP51160 858 aa16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 EML3Q32P44 896 aa16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 CFAP221Q4G0U5 840 aa16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 HSF5Q4G112 596 aaPredicted RBP16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 TSTD1Q8NFU3 115 aa16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 OLIG1Q8TAK6 271 aa16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 USP33Q8TEY7 942 aa16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 FUBP3Q96I24 572 aaKnown RBP eCLIP16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 CDK5RAP3Q96JB5 506 aa16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 FIZ1Q96SL8 496 aa16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 DUS2Q9NX74 493 aaKnown RBP16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 DPP3Q9NY33 737 aa16.76■□□□□ 0.27
RPUSD3-204ENST00000424438 TRAV19A0A0A6YYK7 116 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 K7ENM7 598 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 DCLK1O15075 740 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 TRAK2O60296 914 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 IL18RAPO95256 599 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 HOXD12P35452 270 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 IFNAR2P48551 515 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 DGKEP52429 567 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 LMAN2Q12907 356 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 CYP2U1Q7Z449 544 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 TMEM86AQ8N2M4 240 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 FAM212AQ96EL1 285 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 PKMYT1Q99640 499 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 GCNT4Q9P109 453 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 MMP17Q9ULZ9 603 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 NEUROG3Q9Y4Z2 214 aa16.75■□□□□ 0.27
RPUSD3-204ENST00000424438 DMXL2Q8TDJ6 3036 aa16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 PRPF40AO75400 957 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 FAM13AO94988 1023 aa16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 NFATC1O95644 943 aa16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 MRPS21P82921 87 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 KIAA1211LQ6NV74 962 aa16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 MYCT1Q8N699 235 aa16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 FSIP1Q8NA03 581 aa16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 HVCN1Q96D96 273 aa16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 TMLHEQ9NVH6 421 aa16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 POLR3BQ9NW08 1133 aaPredicted RBP16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 AGO2Q9UKV8 859 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 ARHGAP26Q9UNA1 814 aa16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 KIF3AQ9Y496 699 aa16.74■□□□□ 0.27
RPUSD3-204ENST00000424438 MYO18AQ92614 2054 aaKnown RBP16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 NPHP3-ACAD11A0A0J9YXS1 232 aa16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 EIF4E1BA6NMX2 242 aaKnown RBP16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 TNFRSF10BO14763 440 aa16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 GBP1P32455 592 aa16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 EIF2DP41214 584 aaKnown RBP16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 MAGEA11P43364 429 aa16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 ACOT2P49753 483 aa16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 POSTNQ15063 836 aa16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 ZRSR1Q15695 479 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms