RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 K7EQS6 105 aa18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 TADA3O75528 432 aa18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 PLA2G4BP0C869 781 aa18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 TCF3P15923 654 aa18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 BCKDHBP21953 392 aa18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 GPR15P49685 360 aa18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 LMAN2Q12907 356 aa18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 NR1H3Q13133 447 aa18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 OLIG1Q8TAK6 271 aa18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 ZCCHC14Q8WYQ9 949 aaKnown RBP18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 TRMT2BQ96GJ1 504 aaKnown RBP18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 CYP2S1Q96SQ9 504 aa18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 ODF2LQ9ULJ1 636 aa18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 MAGED2Q9UNF1 606 aaPredicted RBP18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 ASCC3Q8N3C0 2202 aaKnown RBP18.04■□□□□ 0.48
CHCHD3-202ENST00000423635 OBSL1O75147 1896 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 FAM221BA6H8Z2 402 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 PRPF40AO75400 957 aaKnown RBP18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 NOL4O94818 638 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 USP17L7P0C7H9 530 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 IFNAR2P48551 515 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 POU5F1Q01860 360 aaKnown RBP18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 USP4Q13107 963 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 CRY1Q16526 586 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 NFE2Q16621 373 aaPredicted RBP18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 UAP1L1Q3KQV9 507 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 SLC39A4Q6P5W5 647 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 LEO1Q8WVC0 666 aaPredicted RBP18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 PIGKQ92643 395 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 SLC22A12Q96S37 553 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 PI4K2AQ9BTU6 479 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 SLC32A1Q9H598 525 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 DPP3Q9NY33 737 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 MMP17Q9ULZ9 603 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 LHX6Q9UPM6 363 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 WNT6Q9Y6F9 365 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 KIAA1549LQ6ZVL6 1849 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 DSPP15924 2871 aaKnown RBP18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 ANKRD11Q6UB99 2663 aaPredicted RBP18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 MYO16Q9Y6X6 1858 aa18.03■□□□□ 0.48
CHCHD3-202ENST00000423635 KPNA7A9QM74 516 aa18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 UPK3BL1B0FP48 263 aa18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 UPK3BL2E5RIL1 263 aa18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 HYAL3O43820 417 aaPredicted RBP18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 DHPSP49366 369 aaPredicted RBP18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 RPL10AP62906 217 aaKnown RBP18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 HMGN5P82970 282 aaKnown RBP18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 ZRSR1Q15695 479 aaKnown RBP18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 DDR2Q16832 855 aa18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 ANO7Q6IWH7 933 aa18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 CCDC83Q8IWF9 413 aa18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 MDGA1Q8NFP4 955 aa18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 LINC00597Q9H2U6 94 aa18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 ABCB6Q9NP58 842 aa18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 GCNT4Q9P109 453 aa18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 LIMCH1Q9UPQ0 1083 aa18.02■□□□□ 0.48
CHCHD3-202ENST00000423635 TRAV19A0A0A6YYK7 116 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 TNFRSF10BO14763 440 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 OPRD1P41143 372 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 ACOT2P49753 483 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 ZNF131P52739 623 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 TSPY1Q01534 308 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 C2orf27AQ580R0 203 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 TRIM61Q5EBN2 209 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 SDHAF4Q5VUM1 108 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 PIP4P1Q86T03 277 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 EFCAB13Q8IY85 973 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 STKLD1Q8NE28 680 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 PLIN2Q99541 437 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 ACBD6Q9BR61 282 aa18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 NUSAP1Q9BXS6 441 aaKnown RBP18.01■□□□□ 0.47
CHCHD3-202ENST00000423635 CKMP06732 381 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 ABCD1P33897 745 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 P2RY2P41231 377 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 MRPS21P82921 87 aaKnown RBP18■□□□□ 0.47
CHCHD3-202ENST00000423635 GTF2BQ00403 316 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 SEMA3BQ13214 749 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 SV2CQ496J9 727 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 TMEM119Q4V9L6 283 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 SPDYCQ5MJ68 293 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 SLC23A3Q6PIS1 610 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 LPCAT2Q7L5N7 544 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 SYT12Q8IV01 421 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 MYCT1Q8N699 235 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 SH3RF2Q8TEC5 729 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 LRRC15Q8TF66 581 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 FNBP1Q96RU3 617 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 FIZ1Q96SL8 496 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 REEP2Q9BRK0 252 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 TRPC7Q9HCX4 862 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 TMEM74BQ9NUR3 256 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 KLK13Q9UKR3 277 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 STYXL1Q9Y6J8 313 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 NBEAQ8NFP9 2946 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 LAMA5O15230 3695 aa18■□□□□ 0.47
CHCHD3-202ENST00000423635 ANTXRLA6NF34 631 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 ANKRD63C9JTQ0 380 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 K7ENM7 598 aa17.99■□□□□ 0.47
CHCHD3-202ENST00000423635 TAF4O00268 1085 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms