RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ZNF516Q92618 1163 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 NELL2Q99435 816 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 SYT15Q9BQS2 421 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 SLC46A2Q9BY10 475 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 ABCB6Q9NP58 842 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 CRTAC1Q9NQ79 661 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 EXOC1Q9NV70 894 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 MAGED2Q9UNF1 606 aaPredicted RBP16.27■□□□□ 0.2
USB1-202ENST00000423271 MRPS17Q9Y2R5 130 aaKnown RBP16.27■□□□□ 0.2
USB1-202ENST00000423271 NME7Q9Y5B8 376 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 GPR179Q6PRD1 2367 aa16.27■□□□□ 0.19
USB1-202ENST00000423271 PTPRDP23468 1912 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 SLC38A8A6NNN8 435 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 MAN2B1O00754 1011 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 DPYSL4O14531 572 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 LAMTOR5O43504 91 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 TADA3O75528 432 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 PRR29P0C7W0 189 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 MAGEA9P43362 315 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 FAM171BQ6P995 826 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 DPH6Q7L8W6 267 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 SPATA2LQ8IUW3 424 aaPredicted RBP16.26■□□□□ 0.19
USB1-202ENST00000423271 TTC8Q8TAM2 541 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 FAM3CQ92520 227 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 MYLPFQ96A32 169 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 MMS19Q96T76 1030 aa16.26■□□□□ 0.19
USB1-202ENST00000423271 MRPL45Q9BRJ2 306 aaKnown RBP16.26■□□□□ 0.19
USB1-202ENST00000423271 CGNQ9P2M7 1197 aaKnown RBP16.26■□□□□ 0.19
USB1-202ENST00000423271 ZNF638Q14966 1978 aaKnown RBP16.26■□□□□ 0.19
USB1-202ENST00000423271 GOLGA6L4A6NEF3 574 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 NCAM2O15394 837 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 EXOC3O60645 756 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 NOL4O94818 638 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 PDGFRBP09619 1106 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 CSH1P0DML2 217 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 CSH2P0DML3 217 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 WARSP23381 471 aaKnown RBP16.25■□□□□ 0.19
USB1-202ENST00000423271 CCNE1P24864 410 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 WEE1P30291 646 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 SYKP43405 635 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 RPS9P46781 194 aaKnown RBP16.25■□□□□ 0.19
USB1-202ENST00000423271 RPL10AP62906 217 aaKnown RBP16.25■□□□□ 0.19
USB1-202ENST00000423271 MTAPQ13126 283 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 CFAP221Q4G0U5 840 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 TXNDC8Q6A555 127 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 SCN4BQ8IWT1 228 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 CMTM8Q8IZV2 173 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 MAB21L3Q8N8X9 362 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 BPIFB1Q8TDL5 484 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 CSGALNACT1Q8TDX6 532 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 OBP2AQ9NY56 170 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 GTSE1Q9NYZ3 720 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 CDH9Q9ULB4 789 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 CCL26Q9Y258 94 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 OTOGLQ3ZCN5 2332 aa16.25■□□□□ 0.19
USB1-202ENST00000423271 SPTBN4Q9H254 2564 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 GREB1Q4ZG55 1949 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 GADD45BO75293 160 aaPredicted RBP16.24■□□□□ 0.19
USB1-202ENST00000423271 MYL6P60660 151 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 CSTF1Q05048 431 aaKnown RBP16.24■□□□□ 0.19
USB1-202ENST00000423271 TNK2Q07912 1038 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 ARHGAP29Q52LW3 1261 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 WDR44Q5JSH3 913 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 TXNDC11Q6PKC3 985 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 TSSK4Q6SA08 328 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 ADSSL1Q8N142 457 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 RIN3Q8TB24 985 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 GOLGA5Q8TBA6 731 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 ELMO3Q96BJ8 720 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 FUBP3Q96I24 572 aaKnown RBP eCLIP16.24■□□□□ 0.19
USB1-202ENST00000423271 XYLT2Q9H1B5 865 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 KCTD10Q9H3F6 313 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 USP25Q9UHP3 1055 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 FBXO4Q9UKT5 387 aa16.24■□□□□ 0.19
USB1-202ENST00000423271 FRYLO94915 3013 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 ZNF292O60281 2723 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 LRRIQ3A6PVS8 624 aaPredicted RBP16.23■□□□□ 0.19
USB1-202ENST00000423271 SPECC1L-ADORA2AF8WAN1 911 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 RPN1P04843 607 aaKnown RBP16.23■□□□□ 0.19
USB1-202ENST00000423271 BDNFP23560 247 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 AVPR1AP37288 418 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 KPNA1P52294 538 aaPredicted RBP16.23■□□□□ 0.19
USB1-202ENST00000423271 TNNC1P63316 161 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 PSMD2Q13200 908 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 WDR72Q3MJ13 1102 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 MDH1BQ5I0G3 518 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 TDRD10Q5VZ19 366 aaKnown RBP16.23■□□□□ 0.19
USB1-202ENST00000423271 ZC3H14Q6PJT7 736 aaKnown RBP16.23■□□□□ 0.19
USB1-202ENST00000423271 C4orf50Q6ZRC1 276 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 CELF5Q8N6W0 485 aaKnown RBP16.23■□□□□ 0.19
USB1-202ENST00000423271 MRPS31Q92665 395 aaKnown RBP16.23■□□□□ 0.19
USB1-202ENST00000423271 USP13Q92995 863 aaPredicted RBP16.23■□□□□ 0.19
USB1-202ENST00000423271 TRMT2BQ96GJ1 504 aaKnown RBP16.23■□□□□ 0.19
USB1-202ENST00000423271 MYRFLQ96LU7 910 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 CHRDQ9H2X0 955 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 DPEP3Q9H4B8 488 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 LMAN1LQ9HAT1 526 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 PRMT8Q9NR22 394 aaPredicted RBP16.23■□□□□ 0.19
USB1-202ENST00000423271 DMAC2Q9NW81 257 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 MAGEC2Q9UBF1 373 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms