RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 CACNA1IQ9P0X4 2223 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 PATJQ8NI35 1801 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 MYL1P05976 194 aa27.31■■□□□ 1.96
SMDT1-202ENST00000422252 WARSP23381 471 aaKnown RBP27.31■■□□□ 1.96
SMDT1-202ENST00000422252 LMO2P25791 158 aa27.31■■□□□ 1.96
SMDT1-202ENST00000422252 C4orf50Q6ZRC1 276 aa27.31■■□□□ 1.96
SMDT1-202ENST00000422252 BPIFB1Q8TDL5 484 aa27.31■■□□□ 1.96
SMDT1-202ENST00000422252 GZF1Q9H116 711 aaPredicted RBP27.31■■□□□ 1.96
SMDT1-202ENST00000422252 C8orf33Q9H7E9 229 aaPredicted RBP27.31■■□□□ 1.96
SMDT1-202ENST00000422252 UXTQ9UBK9 157 aaPredicted RBP27.31■■□□□ 1.96
SMDT1-202ENST00000422252 ATP2C2O75185 946 aa27.3■■□□□ 1.96
SMDT1-202ENST00000422252 NOL4O94818 638 aa27.3■■□□□ 1.96
SMDT1-202ENST00000422252 CCNE1P24864 410 aa27.3■■□□□ 1.96
SMDT1-202ENST00000422252 KPNA1P52294 538 aaPredicted RBP27.3■■□□□ 1.96
SMDT1-202ENST00000422252 PSMC1P62191 440 aaKnown RBP27.3■■□□□ 1.96
SMDT1-202ENST00000422252 C1orf228Q6PIY5 440 aa27.3■■□□□ 1.96
SMDT1-202ENST00000422252 CELF5Q8N6W0 485 aaKnown RBP27.3■■□□□ 1.96
SMDT1-202ENST00000422252 MAB21L3Q8N8X9 362 aa27.3■■□□□ 1.96
SMDT1-202ENST00000422252 ZNF516Q92618 1163 aa27.3■■□□□ 1.96
SMDT1-202ENST00000422252 ZFYVE19Q96K21 471 aa27.3■■□□□ 1.96
SMDT1-202ENST00000422252 SMG9Q9H0W8 520 aaKnown RBP27.3■■□□□ 1.96
SMDT1-202ENST00000422252 ATP6V1DQ9Y5K8 247 aa27.3■■□□□ 1.96
SMDT1-202ENST00000422252 SLC38A8A6NNN8 435 aa27.29■■□□□ 1.96
SMDT1-202ENST00000422252 SOBPA7XYQ1 873 aa27.29■■□□□ 1.96
SMDT1-202ENST00000422252 LMNAP02545 664 aaKnown RBP27.29■■□□□ 1.96
SMDT1-202ENST00000422252 AVPR1AP37288 418 aa27.29■■□□□ 1.96
SMDT1-202ENST00000422252 MAGEA11P43364 429 aa27.29■■□□□ 1.96
SMDT1-202ENST00000422252 PLCB2Q00722 1185 aa27.29■■□□□ 1.96
SMDT1-202ENST00000422252 CSTF1Q05048 431 aaKnown RBP27.29■■□□□ 1.96
SMDT1-202ENST00000422252 TRPC3Q13507 836 aa27.29■■□□□ 1.96
SMDT1-202ENST00000422252 MAPRE1Q15691 268 aaKnown RBP27.29■■□□□ 1.96
SMDT1-202ENST00000422252 SCN4BQ8IWT1 228 aa27.29■■□□□ 1.96
SMDT1-202ENST00000422252 MRPS31Q92665 395 aaKnown RBP27.29■■□□□ 1.96
SMDT1-202ENST00000422252 MYLPFQ96A32 169 aa27.29■■□□□ 1.96
SMDT1-202ENST00000422252 TRMT2BQ96GJ1 504 aaKnown RBP27.29■■□□□ 1.96
SMDT1-202ENST00000422252 MYRFLQ96LU7 910 aa27.29■■□□□ 1.96
SMDT1-202ENST00000422252 CRTAC1Q9NQ79 661 aa27.29■■□□□ 1.96
SMDT1-202ENST00000422252 THG1LQ9NWX6 298 aaKnown RBP27.29■■□□□ 1.96
SMDT1-202ENST00000422252 MAGEC2Q9UBF1 373 aaPredicted RBP27.29■■□□□ 1.96
SMDT1-202ENST00000422252 F5P12259 2224 aa27.28■■□□□ 1.96
SMDT1-202ENST00000422252 TACC1O75410 805 aa27.28■■□□□ 1.96
SMDT1-202ENST00000422252 PDGFRBP09619 1106 aa27.28■■□□□ 1.96
SMDT1-202ENST00000422252 SYKP43405 635 aa27.28■■□□□ 1.96
SMDT1-202ENST00000422252 TNNC1P63316 161 aa27.28■■□□□ 1.96
SMDT1-202ENST00000422252 MTAPQ13126 283 aa27.28■■□□□ 1.96
SMDT1-202ENST00000422252 WDR72Q3MJ13 1102 aa27.28■■□□□ 1.96
SMDT1-202ENST00000422252 TXNDC8Q6A555 127 aa27.28■■□□□ 1.96
SMDT1-202ENST00000422252 ADSSL1Q8N142 457 aa27.28■■□□□ 1.96
SMDT1-202ENST00000422252 MRPL45Q9BRJ2 306 aaKnown RBP27.28■■□□□ 1.96
SMDT1-202ENST00000422252 SCAND2PQ9GZW5 306 aaPredicted RBP27.28■■□□□ 1.96
SMDT1-202ENST00000422252 CHRDQ9H2X0 955 aa27.28■■□□□ 1.96
SMDT1-202ENST00000422252 SNX25Q9H3E2 840 aa27.28■■□□□ 1.96
SMDT1-202ENST00000422252 LMAN1LQ9HAT1 526 aa27.28■■□□□ 1.96
SMDT1-202ENST00000422252 FAM237AA0A1B0GTK4 181 aa27.27■■□□□ 1.96
SMDT1-202ENST00000422252 STAU1O95793 577 aaKnown RBP27.27■■□□□ 1.96
SMDT1-202ENST00000422252 FAM163BP0C2L3 166 aa27.27■■□□□ 1.96
SMDT1-202ENST00000422252 GNL1P36915 607 aaPredicted RBP27.27■■□□□ 1.96
SMDT1-202ENST00000422252 SOX9P48436 509 aa27.27■■□□□ 1.96
SMDT1-202ENST00000422252 CASP4P49662 377 aa27.27■■□□□ 1.96
SMDT1-202ENST00000422252 NDUFA8P51970 172 aa27.27■■□□□ 1.96
SMDT1-202ENST00000422252 MON1AQ86VX9 555 aa27.27■■□□□ 1.96
SMDT1-202ENST00000422252 PLEKHO2Q8TD55 490 aa27.27■■□□□ 1.96
SMDT1-202ENST00000422252 TMEM174Q8WUU8 243 aa27.27■■□□□ 1.96
SMDT1-202ENST00000422252 IER2Q9BTL4 223 aa27.27■■□□□ 1.96
SMDT1-202ENST00000422252 KCTD10Q9H3F6 313 aa27.27■■□□□ 1.96
SMDT1-202ENST00000422252 PRMT8Q9NR22 394 aaPredicted RBP27.27■■□□□ 1.96
SMDT1-202ENST00000422252 DMAC2Q9NW81 257 aa27.27■■□□□ 1.96
SMDT1-202ENST00000422252 GTSE1Q9NYZ3 720 aa27.27■■□□□ 1.96
SMDT1-202ENST00000422252 DENND4CQ5VZ89 1909 aa27.26■■□□□ 1.95
SMDT1-202ENST00000422252 SPECC1L-ADORA2AF8WAN1 911 aa27.26■■□□□ 1.95
SMDT1-202ENST00000422252 TADA3O75528 432 aa27.26■■□□□ 1.95
SMDT1-202ENST00000422252 RPN1P04843 607 aaKnown RBP27.26■■□□□ 1.95
SMDT1-202ENST00000422252 ATICP31939 592 aa27.26■■□□□ 1.95
SMDT1-202ENST00000422252 MYL6P60660 151 aa27.26■■□□□ 1.95
SMDT1-202ENST00000422252 VSTM1Q6UX27 236 aa27.26■■□□□ 1.95
SMDT1-202ENST00000422252 RALGPS2Q86X27 583 aaPredicted RBP27.26■■□□□ 1.95
SMDT1-202ENST00000422252 SLC9A9Q8IVB4 645 aa27.26■■□□□ 1.95
SMDT1-202ENST00000422252 TTC8Q8TAM2 541 aa27.26■■□□□ 1.95
SMDT1-202ENST00000422252 PARD3BQ8TEW8 1205 aa27.26■■□□□ 1.95
SMDT1-202ENST00000422252 USP13Q92995 863 aaPredicted RBP27.26■■□□□ 1.95
SMDT1-202ENST00000422252 SYAP1Q96A49 352 aaPredicted RBP27.26■■□□□ 1.95
SMDT1-202ENST00000422252 KIF9Q9HAQ2 790 aa27.26■■□□□ 1.95
SMDT1-202ENST00000422252 CCL26Q9Y258 94 aa27.26■■□□□ 1.95
SMDT1-202ENST00000422252 FANCMQ8IYD8 2048 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 PDXKO00764 312 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 PHACTR2O75167 634 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 CHRNB1P11230 501 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 BDNFP23560 247 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 CTHP32929 405 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 AP3M2P53677 418 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 CYP27A1Q02318 531 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 OR6B3Q8NGW1 331 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 MYCBPAPQ8TBZ2 947 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 PCED1BQ96HM7 432 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 XYLT2Q9H1B5 865 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 TDP1Q9NUW8 608 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 NME7Q9Y5B8 376 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 CFAP54Q96N23 3096 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 OBSL1O75147 1896 aa27.25■■□□□ 1.95
SMDT1-202ENST00000422252 A0A1W2PQ27 194 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms