RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 LDHAP00338 332 aaKnown RBP12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 CST3P01034 146 aaPredicted RBP12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 DLATP10515 647 aaKnown RBP12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 PNPLA4P41247 253 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 AFMP43652 599 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 GALK1P51570 392 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 ATXN1P54253 815 aaKnown RBP12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 NRLP54845 237 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 MYL7Q01449 175 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 CYP27A1Q02318 531 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 RUNX3Q13761 415 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 LRRC32Q14392 662 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 PUM1Q14671 1186 aaKnown RBP eCLIP12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 E2F4Q16254 413 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 CC2D1AQ6P1N0 951 aaPredicted RBP12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 CEP68Q76N32 757 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 C2orf15Q8WU43 125 aaKnown RBP12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 MRPS31Q92665 395 aaKnown RBP12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 SECISBP2LQ93073 1101 aaKnown RBP12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 FAM83CQ9BQN1 747 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 ACBD6Q9BR61 282 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 MRPL45Q9BRJ2 306 aaKnown RBP12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 BACH2Q9BYV9 841 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 LINC00597Q9H2U6 94 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 CRTAC1Q9NQ79 661 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 TDP1Q9NUW8 608 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 HSFX1Q9UBD0 423 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 ITGA11Q9UKX5 1188 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 INVSQ9Y283 1065 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 R3HCC1Q9Y3T6 440 aaKnown RBP12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 NME7Q9Y5B8 376 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 DMDP11532 3685 aa12.16□□□□□ -0.46
NDUFA3-208ENST00000422029 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 GDF9O60383 454 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 CLSTN1O94985 981 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 ABL1P00519 1130 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 TNNC2P02585 160 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 CSH1P0DML2 217 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 CSH2P0DML3 217 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 BDNFP23560 247 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 PAX3P23760 479 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 NASPP49321 788 aaPredicted RBP12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 USP46P62068 366 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 RPL10AP62906 217 aaKnown RBP12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 FOXK2Q01167 660 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 IFRD2Q12894 506 aaPredicted RBP12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 PSMD2Q13200 908 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 CCINQ13939 588 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 PPP2R5DQ14738 602 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 NFE2Q16621 373 aaPredicted RBP12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 DGKKQ5KSL6 1271 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 HS2ST1Q7LGA3 356 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 MON1AQ86VX9 555 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 NT5DC4Q86YG4 428 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 KBTBD7Q8WVZ9 684 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 MYLPFQ96A32 169 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 ANKRD36BP1Q96IX9 119 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 SYT15Q9BQS2 421 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 TRIM9Q9C026 710 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 SMOC1Q9H4F8 434 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 ZSCAN16Q9H4T2 348 aaPredicted RBP12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 TMEM206Q9H813 350 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 SLC39A2Q9NP94 309 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.15□□□□□ -0.463e-6■■■□□ 16.8
NDUFA3-208ENST00000422029 OBP2AQ9NY56 170 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 DLL3Q9NYJ7 618 aa12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 ZNF638Q14966 1978 aaKnown RBP12.15□□□□□ -0.46
NDUFA3-208ENST00000422029 NUP210Q8TEM1 1887 aaPredicted RBP12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 SDK1Q7Z5N4 2213 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 CEP250Q9BV73 2442 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 CLDN5O00501 218 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 POLR2DO15514 142 aaKnown RBP12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 TGFB1I1O43294 461 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 RNF40O75150 1001 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 NOL4O94818 638 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 CKMP06732 381 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 TNNI1P19237 187 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 GRIK1P39086 918 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 CASP4P49662 377 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 CACNA2D1P54289 1103 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 MYO1EQ12965 1108 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 PKP1Q13835 747 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 DUOXA2Q1HG44 320 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 MDH1BQ5I0G3 518 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 TRAPPC11Q7Z392 1133 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 FAM160A2Q8N612 972 aaPredicted RBP12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 TOP6BLQ8N6T0 577 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 LRRC52Q8N7C0 313 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 ZNF516Q92618 1163 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 INTS4Q96HW7 963 aaKnown RBP12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 ZNF396Q96N95 335 aaPredicted RBP12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 HHIPQ96QV1 700 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 FAM126AQ9BYI3 521 aaPredicted RBP12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 DPEP3Q9H4B8 488 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 AGPAT3Q9NRZ7 376 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 DUS2Q9NX74 493 aaKnown RBP12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 SMPD4Q9NXE4 827 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 GDAP2Q9NXN4 497 aa12.14□□□□□ -0.47
NDUFA3-208ENST00000422029 MAGEC2Q9UBF1 373 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms