RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 TOP3BO95985 862 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 PLA2G4BP0C869 781 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 GBP1P32455 592 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 GPR15P49685 360 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 TAF6P49848 677 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 HMGN5P82970 282 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 FAM160A1Q05DH4 1040 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 TMEM119Q4V9L6 283 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 WSCD1Q658N2 575 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 RASSF3Q86WH2 238 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 METTL23Q86XA0 190 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 THEM5Q8N1Q8 247 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 STKLD1Q8NE28 680 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 OSCP1Q8WVF1 389 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 MRPS31Q92665 395 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 CD101Q93033 1021 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 ATP2A3Q93084 1043 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 EXOC4Q96A65 974 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 PYM1Q9BRP8 204 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 MSTO1Q9BUK6 570 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 TMLHEQ9NVH6 421 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 ODF2LQ9ULJ1 636 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 LIMCH1Q9UPQ0 1083 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 ANK1P16157 1881 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 MYO16Q9Y6X6 1858 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 MYH11P35749 1972 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 SCN1AP35498 2009 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 SRRM3A6NNA2 597 aaPredicted RBP11□□□□□ -0.65
TNFAIP3-202ENST00000420009 PATE3B3GLJ2 98 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 KHNYNO15037 678 aaKnown RBP11□□□□□ -0.65
TNFAIP3-202ENST00000420009 NOL4O94818 638 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 CSH1P0DML2 217 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 CSH2P0DML3 217 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 BCKDHBP21953 392 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 DGKEP52429 567 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 ZNF131P52739 623 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 ATP2C1P98194 919 aaPredicted RBP11□□□□□ -0.65
TNFAIP3-202ENST00000420009 ACAP1Q15027 740 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 ZRSR1Q15695 479 aaKnown RBP11□□□□□ -0.65
TNFAIP3-202ENST00000420009 EML3Q32P44 896 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 CYP2U1Q7Z449 544 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 DCP1BQ8IZD4 617 aaKnown RBP11□□□□□ -0.65
TNFAIP3-202ENST00000420009 TSTD1Q8NFU3 115 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 LEO1Q8WVC0 666 aaPredicted RBP11□□□□□ -0.65
TNFAIP3-202ENST00000420009 TRMT2BQ96GJ1 504 aaKnown RBP11□□□□□ -0.65
TNFAIP3-202ENST00000420009 CNOT6LQ96LI5 555 aaKnown RBP11□□□□□ -0.65
TNFAIP3-202ENST00000420009 SLC22A12Q96S37 553 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 FIZ1Q96SL8 496 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 REEP2Q9BRK0 252 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 SCNM1Q9BWG6 230 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 ASB7Q9H672 318 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 TMEM206Q9H813 350 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 DUS2Q9NX74 493 aaKnown RBP11□□□□□ -0.65
TNFAIP3-202ENST00000420009 PCDHB5Q9Y5E4 795 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 WNT6Q9Y6F9 365 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 LAMA5O15230 3695 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 DMXL2Q8TDJ6 3036 aa11□□□□□ -0.65
TNFAIP3-202ENST00000420009 AKAP13Q12802 2813 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 ATG2BQ96BY7 2078 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 K7ENM7 598 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 TCF3P15923 654 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 IFNAR2P48551 515 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 NFE2Q16621 373 aaPredicted RBP10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 SV2CQ496J9 727 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 USP39Q53GS9 565 aaKnown RBP10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 EFCAB13Q8IY85 973 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 MDGA1Q8NFP4 955 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 OLIG1Q8TAK6 271 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 USP33Q8TEY7 942 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 LRRC15Q8TF66 581 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 ZCCHC14Q8WYQ9 949 aaKnown RBP10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 MYRFLQ96LU7 910 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 PLIN2Q99541 437 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 PKMYT1Q99640 499 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 PI4K2AQ9BTU6 479 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 TPSD1Q9BZJ3 242 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 ABCB6Q9NP58 842 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 GCNT4Q9P109 453 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 UXTQ9UBK9 157 aaPredicted RBP10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 EVLQ9UI08 416 aaPredicted RBP10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 MAGED2Q9UNF1 606 aaPredicted RBP10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 INVSQ9Y283 1065 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 NUP205Q92621 2012 aa10.99□□□□□ -0.65
TNFAIP3-202ENST00000420009 SMG1Q96Q15 3661 aaKnown RBP10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 TRAV19A0A0A6YYK7 116 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 KPNA7A9QM74 516 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 TISP43B9A030 160 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 ANKRD63C9JTQ0 380 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 K7EQS6 105 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 PRPF40AO75400 957 aaKnown RBP10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 CKMP06732 381 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 USP17L7P0C7H9 530 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 OPRD1P41143 372 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 ACOT2P49753 483 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 IRX4P78413 519 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 TSPY1Q01534 308 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 POU5F1Q01860 360 aaKnown RBP10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 DDR2Q16832 855 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 GAB4Q2WGN9 574 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 SDHAF4Q5VUM1 108 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms