RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 GNL1P36915 607 aaPredicted RBP22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 VIPR2P41587 438 aa22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 CACNA2D1P54289 1103 aa22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 UBE2HP62256 183 aa22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 TNNC1P63316 161 aa22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 ISM2Q6H9L7 571 aa22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 VITQ6UXI7 678 aa22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 PRSS33Q8NF86 280 aa22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 ZSCAN18Q8TBC5 510 aaPredicted RBP22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 MYRFLQ96LU7 910 aa22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 DUSP9Q99956 384 aaKnown RBP22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 R3HCC1Q9Y3T6 440 aaKnown RBP22.03■■□□□ 1.12
PKNOX1-202ENST00000418336 MYO15AQ9UKN7 3530 aa22.02■■□□□ 1.12
PKNOX1-202ENST00000418336 ARNTLO00327 626 aa22.02■■□□□ 1.12
PKNOX1-202ENST00000418336 PI15O43692 258 aa22.02■■□□□ 1.12
PKNOX1-202ENST00000418336 CYP4F8P98187 520 aa22.02■■□□□ 1.12
PKNOX1-202ENST00000418336 PAQR9Q6ZVX9 377 aa22.02■■□□□ 1.12
PKNOX1-202ENST00000418336 TAF4BQ92750 862 aa22.02■■□□□ 1.12
PKNOX1-202ENST00000418336 SEMA4DQ92854 862 aa22.02■■□□□ 1.12
PKNOX1-202ENST00000418336 TRMT2BQ96GJ1 504 aaKnown RBP22.02■■□□□ 1.12
PKNOX1-202ENST00000418336 DDX23Q9BUQ8 820 aaKnown RBP22.02■■□□□ 1.12
PKNOX1-202ENST00000418336 BCO2Q9BYV7 579 aa22.02■■□□□ 1.12
PKNOX1-202ENST00000418336 HMGXB4Q9UGU5 601 aa22.02■■□□□ 1.12
PKNOX1-202ENST00000418336 HCN4Q9Y3Q4 1203 aa22.02■■□□□ 1.12
PKNOX1-202ENST00000418336 SLC38A8A6NNN8 435 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 SLC16A3O15427 465 aaKnown RBP22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 PTPN1P18031 435 aaKnown RBP22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 CCNE1P24864 410 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 GTF2H1P32780 548 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 NLRP12P59046 1061 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 SGSM1Q2NKQ1 1148 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 ZNF667Q5HYK9 610 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 MDH1BQ5I0G3 518 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 ASTLQ6HA08 431 aaPredicted RBP22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 TTI2Q6NXR4 508 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 SPATA2LQ8IUW3 424 aaPredicted RBP22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 OR6B3Q8NGW1 331 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 B3GNT5Q9BYG0 378 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 GTPBP4Q9BZE4 634 aaKnown RBP22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 GPR88Q9GZN0 384 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 KCNH6Q9H252 994 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 SNX25Q9H3E2 840 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 TMEM8AQ9HCN3 771 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 HOOK1Q9UJC3 728 aaKnown RBP22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 CA14Q9ULX7 337 aa22.01■■□□□ 1.11
PKNOX1-202ENST00000418336 ANAPC1Q9H1A4 1944 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 PRAMEF12O95522 483 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 FGF19O95750 216 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 AOC1P19801 751 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 BDNFP23560 247 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 CLCN5P51795 746 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 STARD6P59095 220 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 LRRC63Q05C16 580 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 TCF15Q12870 199 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 VEPH1Q14D04 833 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 FOXR2Q6PJQ5 311 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 VSTM1Q6UX27 236 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 SCARA5Q6ZMJ2 495 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 SUGP1Q8IWZ8 645 aaKnown RBP22■■□□□ 1.11
PKNOX1-202ENST00000418336 B3GALNT2Q8NCR0 500 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 SPATA17Q96L03 361 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 SLC46A2Q9BY10 475 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 ATXN3LQ9H3M9 355 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 ZFP14Q9HCL3 533 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 ARHGEF3Q9NR81 526 aa22■■□□□ 1.11
PKNOX1-202ENST00000418336 MAGEC2Q9UBF1 373 aaPredicted RBP22■■□□□ 1.11
PKNOX1-202ENST00000418336 A8MXQ7 604 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 CETN3O15182 167 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 CSH1P0DML2 217 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 CSH2P0DML3 217 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 CDC25CP30307 473 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 ANP32AP39687 249 aaKnown RBP21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 USP46P62068 366 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 RPL10AP62906 217 aaKnown RBP21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 FKBP3Q00688 224 aaKnown RBP21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 INCA1Q0VD86 236 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 GRM2Q14416 872 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 MAPRE1Q15691 268 aaKnown RBP21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 CBWD6Q4V339 395 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 CBWD3Q5JTY5 395 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 CBWD5Q5RIA9 395 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 GPR158Q5T848 1215 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 C4orf50Q6ZRC1 276 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 RIN3Q8TB24 985 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 FAM200AQ8TCP9 573 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 WHAMMQ8TF30 809 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 DHTKD1Q96HY7 919 aaPredicted RBP21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 MED15Q96RN5 788 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 TWNKQ96RR1 684 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 ZNF518BQ9C0D4 1074 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 DLGAP2Q9P1A6 1054 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 FBXL21Q9UKT6 434 aa21.99■■□□□ 1.11
PKNOX1-202ENST00000418336 CLDN5O00501 218 aa21.98■■□□□ 1.11
PKNOX1-202ENST00000418336 KRT13P13646 458 aa21.98■■□□□ 1.11
PKNOX1-202ENST00000418336 PIK3CAP42336 1068 aa21.98■■□□□ 1.11
PKNOX1-202ENST00000418336 FCHO2Q0JRZ9 810 aa21.98■■□□□ 1.11
PKNOX1-202ENST00000418336 PHLDB3Q6NSJ2 640 aa21.98■■□□□ 1.11
PKNOX1-202ENST00000418336 ARID3BQ8IVW6 561 aaPredicted RBP21.98■■□□□ 1.11
PKNOX1-202ENST00000418336 MFSD6LQ8IWD5 586 aa21.98■■□□□ 1.11
PKNOX1-202ENST00000418336 ZNF687Q8N1G0 1237 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms