RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 OBSL1O75147 1896 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 F11P03951 625 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 DCNP07585 359 aaKnown RBP16.7■□□□□ 0.26
ITGB1-204ENST00000417122 RPL13P26373 211 aaKnown RBP16.7■□□□□ 0.26
ITGB1-204ENST00000417122 GDI1P31150 447 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
ITGB1-204ENST00000417122 NLRP12P59046 1061 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 CYP27A1Q02318 531 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 NCOA4Q13772 614 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 ZNF699Q32M78 642 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 TPRG1Q6ZUI0 275 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 GPIHBP1Q8IV16 184 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 SCN4BQ8IWT1 228 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 SMYD4Q8IYR2 804 aaPredicted RBP16.7■□□□□ 0.26
ITGB1-204ENST00000417122 MYCBPAPQ8TBZ2 947 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 RSPRY1Q96DX4 576 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 HEBP1Q9NRV9 189 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 RMND1Q9NWS8 449 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 NME7Q9Y5B8 376 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 TICRRQ7Z2Z1 1910 aa16.7■□□□□ 0.26
ITGB1-204ENST00000417122 MUC6Q6W4X9 2439 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 PTPRDP23468 1912 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 SLC38A8A6NNN8 435 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 DPYSL4O14531 572 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 IKBKBO14920 756 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 ZNF263O14978 683 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 AKAP3O75969 853 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 NOL4O94818 638 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 VNN1O95497 513 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 WEE1P30291 646 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 MAGEA11P43364 429 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 VAMP7P51809 220 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 ADAM9Q13443 819 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 ZNF667Q5HYK9 610 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 INTS8Q75QN2 995 aaKnown RBP16.69■□□□□ 0.26
ITGB1-204ENST00000417122 TMEM150AQ86TG1 271 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 ALYREFQ86V81 257 aaKnown RBP16.69■□□□□ 0.26
ITGB1-204ENST00000417122 YAF2Q8IY57 180 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 PCED1BQ96HM7 432 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 TIGD1Q96MW7 591 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 GSDMAQ96QA5 445 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 PHOX2BQ99453 314 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 SLC46A2Q9BY10 475 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 TRPV5Q9NQA5 729 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 FAM86C1Q9NVL1 165 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 OBP2AQ9NY56 170 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 UXTQ9UBK9 157 aaPredicted RBP16.69■□□□□ 0.26
ITGB1-204ENST00000417122 ZMYM5Q9UJ78 669 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 COL4A2P08572 1712 aa16.69■□□□□ 0.26
ITGB1-204ENST00000417122 A8MXQ7 604 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 KRT13P13646 458 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 PTPN1P18031 435 aaKnown RBP16.68■□□□□ 0.26
ITGB1-204ENST00000417122 CD72P21854 359 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 BDNFP23560 247 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 DDX6P26196 483 aaKnown RBP eCLIP16.68■□□□□ 0.26
ITGB1-204ENST00000417122 PSMC2P35998 433 aaKnown RBP16.68■□□□□ 0.26
ITGB1-204ENST00000417122 GRIK1P39086 918 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 FCHO2Q0JRZ9 810 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 UBXN2BQ14CS0 331 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 SGSM1Q2NKQ1 1148 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 ZACNQ401N2 412 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 ZCWPW2Q504Y3 356 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 MDH1BQ5I0G3 518 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 C1orf220Q5T0J3 134 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 VSTM1Q6UX27 236 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 SV2AQ7L0J3 742 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 FAM186BQ8IYM0 893 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 ELMO3Q96BJ8 720 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 TRMT2BQ96GJ1 504 aaKnown RBP16.68■□□□□ 0.26
ITGB1-204ENST00000417122 MYRFLQ96LU7 910 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 DPEP3Q9H4B8 488 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 LTB4R2Q9NPC1 389 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 DLGAP2Q9P1A6 1054 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 HOOK1Q9UJC3 728 aaKnown RBP16.68■□□□□ 0.26
ITGB1-204ENST00000417122 MTF2Q9Y483 593 aaPredicted RBP16.68■□□□□ 0.26
ITGB1-204ENST00000417122 GREB1Q4ZG55 1949 aa16.68■□□□□ 0.26
ITGB1-204ENST00000417122 FAM170BA6NMN3 283 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 CHADO15335 359 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 LRRN2O75325 713 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 SMC2O95347 1197 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 PRAMEF12O95522 483 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 PRCPP42785 496 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 RAP1GAPP47736 663 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 MRE11P49959 708 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 CDH8P55286 799 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 ANGPT1Q15389 498 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 EDRF1Q3B7T1 1238 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 ZNF658Q5TYW1 1059 aaPredicted RBP16.67■□□□□ 0.26
ITGB1-204ENST00000417122 ZNF852Q6ZMS4 543 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 CMTM8Q8IZV2 173 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 MAB21L3Q8N8X9 362 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 MRPS31Q92665 395 aaKnown RBP16.67■□□□□ 0.26
ITGB1-204ENST00000417122 TAF4BQ92750 862 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 ERCC4Q92889 916 aaPredicted RBP16.67■□□□□ 0.26
ITGB1-204ENST00000417122 SMARCE1Q969G3 411 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 SPATA17Q96L03 361 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 LRRC3BQ96PB8 259 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 NELL2Q99435 816 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 OSBPL6Q9BZF3 934 aa16.67■□□□□ 0.26
ITGB1-204ENST00000417122 SMYD3Q9H7B4 428 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms