RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 AVPR1AP37288 418 aa21.91■■□□□ 1.1
PTPRU-203ENST00000415600 WNT7BP56706 349 aa21.91■■□□□ 1.1
PTPRU-203ENST00000415600 PNOCQ13519 176 aa21.91■■□□□ 1.1
PTPRU-203ENST00000415600 LUZP1Q86V48 1076 aa21.91■■□□□ 1.1
PTPRU-203ENST00000415600 CBWD2Q8IUF1 395 aa21.91■■□□□ 1.1
PTPRU-203ENST00000415600 XXYLT1Q8NBI6 393 aa21.91■■□□□ 1.1
PTPRU-203ENST00000415600 ATRIPQ8WXE1 791 aa21.91■■□□□ 1.1
PTPRU-203ENST00000415600 MRPS31Q92665 395 aaKnown RBP21.91■■□□□ 1.1
PTPRU-203ENST00000415600 FUBP3Q96I24 572 aaKnown RBP eCLIP21.91■■□□□ 1.1
PTPRU-203ENST00000415600 PCDHGA2Q9Y5H1 932 aa21.91■■□□□ 1.1
PTPRU-203ENST00000415600 R4GN57 208 aa21.91■■□□□ 1.1
PTPRU-203ENST00000415600 CSTF1Q05048 431 aaKnown RBP21.91■■□□□ 1.1
PTPRU-203ENST00000415600 LRRC32Q14392 662 aa21.91■■□□□ 1.1
PTPRU-203ENST00000415600 IQCB1Q15051 598 aa21.91■■□□□ 1.1
PTPRU-203ENST00000415600 CELF5Q8N6W0 485 aaKnown RBP21.91■■□□□ 1.1
PTPRU-203ENST00000415600 PI4K2AQ9BTU6 479 aa21.91■■□□□ 1.1
PTPRU-203ENST00000415600 FAM126AQ9BYI3 521 aaPredicted RBP21.91■■□□□ 1.1
PTPRU-203ENST00000415600 NAT10Q9H0A0 1025 aaKnown RBP21.91■■□□□ 1.1
PTPRU-203ENST00000415600 SIX4Q9UIU6 781 aa21.91■■□□□ 1.1
PTPRU-203ENST00000415600 CACNA1IQ9P0X4 2223 aa21.9■■□□□ 1.1
PTPRU-203ENST00000415600 NRG2O14511 850 aaPredicted RBP21.9■■□□□ 1.1
PTPRU-203ENST00000415600 SLFN14P0C7P3 912 aa21.9■■□□□ 1.1
PTPRU-203ENST00000415600 DLATP10515 647 aaKnown RBP21.9■■□□□ 1.1
PTPRU-203ENST00000415600 AFMP43652 599 aa21.9■■□□□ 1.1
PTPRU-203ENST00000415600 CYP2J2P51589 502 aa21.9■■□□□ 1.1
PTPRU-203ENST00000415600 STXBP5Q5T5C0 1151 aa21.9■■□□□ 1.1
PTPRU-203ENST00000415600 GLIS3Q8NEA6 775 aa21.9■■□□□ 1.1
PTPRU-203ENST00000415600 BPIFB1Q8TDL5 484 aa21.9■■□□□ 1.1
PTPRU-203ENST00000415600 BPIFA3Q9BQP9 254 aa21.9■■□□□ 1.1
PTPRU-203ENST00000415600 KIF9Q9HAQ2 790 aa21.9■■□□□ 1.1
PTPRU-203ENST00000415600 NRLP54845 237 aa21.89■■□□□ 1.09
PTPRU-203ENST00000415600 CFAP221Q4G0U5 840 aa21.89■■□□□ 1.09
PTPRU-203ENST00000415600 LMBRD2Q68DH5 695 aaPredicted RBP21.89■■□□□ 1.09
PTPRU-203ENST00000415600 RALGPS2Q86X27 583 aaPredicted RBP21.89■■□□□ 1.09
PTPRU-203ENST00000415600 NELFCDQ8IXH7 590 aa21.89■■□□□ 1.09
PTPRU-203ENST00000415600 CMTM8Q8IZV2 173 aa21.89■■□□□ 1.09
PTPRU-203ENST00000415600 CXorf38Q8TB03 319 aa21.89■■□□□ 1.09
PTPRU-203ENST00000415600 SCFD1Q8WVM8 642 aa21.89■■□□□ 1.09
PTPRU-203ENST00000415600 HINFPQ9BQA5 517 aa21.89■■□□□ 1.09
PTPRU-203ENST00000415600 BLZF1Q9H2G9 400 aa21.89■■□□□ 1.09
PTPRU-203ENST00000415600 CHRDQ9H2X0 955 aa21.89■■□□□ 1.09
PTPRU-203ENST00000415600 EXOC1Q9NV70 894 aa21.89■■□□□ 1.09
PTPRU-203ENST00000415600 EHD2Q9NZN4 543 aa21.89■■□□□ 1.09
PTPRU-203ENST00000415600 CDH9Q9ULB4 789 aa21.89■■□□□ 1.09
PTPRU-203ENST00000415600 MAGED2Q9UNF1 606 aaPredicted RBP21.89■■□□□ 1.09
PTPRU-203ENST00000415600 PCDHA5Q9Y5H7 936 aa21.89■■□□□ 1.09
PTPRU-203ENST00000415600 GABRDO14764 452 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 MYL1P05976 194 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 HOXD13P35453 343 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 CYP4F8P98187 520 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 TRPC3Q13507 836 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 PSMD6Q15008 389 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 KNOP1Q1ED39 458 aaKnown RBP21.88■■□□□ 1.09
PTPRU-203ENST00000415600 BMT2Q1RMZ1 405 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 DPCR1Q3MIW9 517 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 MAMSTRQ6ZN01 415 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 TRAPPC11Q7Z392 1133 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 RDH13Q8NBN7 331 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 OR5B17Q8NGF7 314 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 CEP295NLQ96MC4 621 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 MMS19Q96T76 1030 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 CGRRF1Q99675 332 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 MKNK1Q9BUB5 465 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 IL21Q9HBE4 155 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 ZSCAN32Q9NX65 697 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 GTF3C4Q9UKN8 822 aa21.88■■□□□ 1.09
PTPRU-203ENST00000415600 ARNTLO00327 626 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 EXOC3O60645 756 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 ACAT1P24752 427 aaKnown RBP21.87■■□□□ 1.09
PTPRU-203ENST00000415600 CCNE1P24864 410 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 CCR3P51677 355 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 AMPD2Q01433 879 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 CYP24A1Q07973 514 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 EHHADHQ08426 723 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 PSMD2Q13200 908 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 SOWAHAQ2M3V2 549 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 CC2D1AQ6P1N0 951 aaPredicted RBP21.87■■□□□ 1.09
PTPRU-203ENST00000415600 C12orf56Q8IXR9 622 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 CCDC47Q96A33 483 aaKnown RBP21.87■■□□□ 1.09
PTPRU-203ENST00000415600 CCDC127Q96BQ5 260 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 SYT15Q9BQS2 421 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 SNX25Q9H3E2 840 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 LMAN1LQ9HAT1 526 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 SLC39A2Q9NP94 309 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 TMLHEQ9NVH6 421 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 MAGEC2Q9UBF1 373 aaPredicted RBP21.87■■□□□ 1.09
PTPRU-203ENST00000415600 GVINP1Q7Z2Y8 2422 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 BIN1O00499 593 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 TGFB1I1O43294 461 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 FAM163BP0C2L3 166 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 PRR29P0C7W0 189 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 MAGEA11P43364 429 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 CDR1P51861 262 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 TNNC1P63316 161 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 VSTM1Q6UX27 236 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 MAML2Q8IZL2 1156 aaPredicted RBP21.87■■□□□ 1.09
PTPRU-203ENST00000415600 SPATA20Q8TB22 786 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 SECISBP2LQ93073 1101 aaKnown RBP21.87■■□□□ 1.09
PTPRU-203ENST00000415600 EXOC4Q96A65 974 aa21.87■■□□□ 1.09
PTPRU-203ENST00000415600 RSPRY1Q96DX4 576 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms