RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 SMG5Q9UPR3 1016 aaKnown RBP8.2□□□□□ -1.1
SIK3-203ENST00000415541 WASF2Q9Y6W5 498 aa8.2□□□□□ -1.1
SIK3-203ENST00000415541 ZNF541Q9H0D2 1346 aa8.2□□□□□ -1.1
SIK3-203ENST00000415541 THAP12O43422 761 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 MAGEC1O60732 1142 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 CNOT3O75175 753 aaKnown RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 OXSR1O95747 527 aaPredicted RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 VCLP18206 1134 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 FXR2P51116 673 aaKnown RBP eCLIP8.19□□□□□ -1.1
SIK3-203ENST00000415541 DNAL1Q4LDG9 190 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 C1orf146Q5VVC0 180 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 FKBP1CQ5VVH2 108 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 ALKBH5Q6P6C2 394 aaKnown RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 KCNK18Q7Z418 384 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 ERI1Q8IV48 349 aaKnown RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 KSR1Q8IVT5 923 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 ANKLE1Q8NAG6 615 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 TTLL3Q9Y4R7 772 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 ROBO3Q96MS0 1386 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 A0A0A6YYK5 440 aaPredicted RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 C19orf81C9J6K1 198 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 RASA4BC9J798 803 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 HNRNPDLO14979 420 aaKnown RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 RASA4O43374 803 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 EDF1O60869 148 aaKnown RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 ZBED1O96006 694 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 ICAM1P05362 532 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 CYP2C9P11712 490 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 QARSP47897 775 aaKnown RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 EMP3P54852 163 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 PSMC6P62333 389 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 LRRC63Q05C16 580 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 STXBP2Q15833 593 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 KCTD21Q4G0X4 260 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 USP37Q86T82 979 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 CCDC105Q8IYK2 499 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 TTC25Q96NG3 672 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 USP29Q9HBJ7 922 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 ADARB2Q9NS39 739 aaKnown RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 GID8Q9NWU2 228 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 RRN3Q9NYV6 651 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 GIT1Q9Y2X7 761 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 SPO11Q9Y5K1 396 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 GSTTP1A0A1W2PQM5 241 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 RSPH10B2B2RC85 870 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 MEIS2O14770 477 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 ADCY6O43306 1168 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 TPPPO94811 219 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 GGPS1O95749 300 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 RSPH10BP0C881 870 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 PIM1P11309 404 aaPredicted RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 KRT5P13647 590 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 TNNI1P19237 187 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 DMP1Q13316 513 aaPredicted RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 ZNF394Q53GI3 561 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 ADGRG6Q86SQ4 1221 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 GPC2Q8N158 579 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 ALLCQ8N6M5 410 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 UBL4BQ8N7F7 174 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 LSM14AQ8ND56 463 aaKnown RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 U2AF1L4Q8WU68 220 aaKnown RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 POMGNT1Q8WZA1 660 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 BTBD9Q96Q07 612 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 C7orf25Q9BPX7 421 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 REEP2Q9BRK0 252 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 PACSIN1Q9BY11 444 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 VPS33BQ9H267 617 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 ATAD3AQ9NVI7 634 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 EXOC7Q9UPT5 735 aa8.19□□□□□ -1.1
SIK3-203ENST00000415541 MTO1Q9Y2Z2 717 aaKnown RBP8.19□□□□□ -1.1
SIK3-203ENST00000415541 MYH6P13533 1939 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 WDR64B1ANS9 1081 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 ZBTB39O15060 712 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 VILLO15195 856 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 SLC16A4O15374 487 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 TNFAIP8O95379 198 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 GH1P01241 217 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 P4HBP07237 508 aaKnown RBP8.18□□□□□ -1.1
SIK3-203ENST00000415541 HSPA8P11142 646 aaKnown RBP8.18□□□□□ -1.1
SIK3-203ENST00000415541 CDH3P22223 829 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 EPHX2P34913 555 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 SREBF1P36956 1147 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 RAP1GDS1P52306 607 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 NR1H2P55055 460 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 POU5F1Q01860 360 aaKnown RBP8.18□□□□□ -1.1
SIK3-203ENST00000415541 MOGSQ13724 837 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 STAT4Q14765 748 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 SMUG1Q53HV7 270 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 SEL1L2Q5TEA6 688 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 ZDHHC24Q6UX98 284 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 RGS9BPQ6ZS82 235 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 ADAT2Q7Z6V5 191 aaKnown RBP8.18□□□□□ -1.1
SIK3-203ENST00000415541 TMPRSS6Q8IU80 811 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 GUF1Q8N442 669 aaKnown RBP8.18□□□□□ -1.1
SIK3-203ENST00000415541 LRRC57Q8N9N7 239 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 C10orf82Q8WW14 230 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 SLC7A3Q8WY07 619 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 MTBPQ96DY7 904 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 MIPEPQ99797 713 aa8.18□□□□□ -1.1
SIK3-203ENST00000415541 MXRA8Q9BRK3 442 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms