RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 DHRS4Q9BTZ2 278 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 MSTO1Q9BUK6 570 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 DHX33Q9H6R0 707 aaKnown RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 RPAP3Q9H6T3 665 aaPredicted RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 TLE6Q9H808 572 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 ALG13Q9NP73 1137 aaKnown RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 ZFATQ9P243 1243 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 PCDHGC3Q9UN70 934 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 ZBTB12Q9Y330 459 aaPredicted RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 LRRC42Q9Y546 428 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 C2orf71A6NGG8 1288 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 GOLGA8SH3BPF8 625 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 GOLGA8MH3BSY2 632 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 CLGNO14967 610 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 RGS20O76081 388 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 APBA3O96018 575 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 ATP4AP20648 1035 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 GNPTABQ3T906 1256 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 DCUN1D2Q6PH85 259 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 POTEAQ6S8J7 498 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 WDR49Q8IV35 697 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 THNSL1Q8IYQ7 743 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 TAB3Q8N5C8 712 aaPredicted RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 ENDOVQ8N8Q3 282 aaKnown RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 ATP11CQ8NB49 1132 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 ARMC2Q8NEN0 867 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 RFWD2Q8NHY2 731 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 NIFKQ9BYG3 293 aaKnown RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 VPS11Q9H270 941 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 STRIP2Q9ULQ0 834 aa10.29□□□□□ -0.76
CD44-206ENST00000415148 MAFBQ9Y5Q3 323 aaPredicted RBP10.29□□□□□ -0.76
CD44-206ENST00000415148 E7ESA3 106 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 F8VP50 259 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 SGK1O00141 431 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 WNT10BO00744 389 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 ASS1P00966 412 aaKnown RBP10.28□□□□□ -0.76
CD44-206ENST00000415148 LMNAP02545 664 aaKnown RBP10.28□□□□□ -0.76
CD44-206ENST00000415148 KRT7P08729 469 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 TROVE2P10155 538 aaKnown RBP eCLIP10.28□□□□□ -0.76
CD44-206ENST00000415148 GLRA2P23416 452 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 PTPN4P29074 926 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 PTDSS1P48651 473 aaKnown RBP10.28□□□□□ -0.76
CD44-206ENST00000415148 SESN3P58005 492 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 GPX6P59796 221 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 CBLBQ13191 982 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 SURF1Q15526 300 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 TAZQ16635 292 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 SGSM1Q2NKQ1 1148 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 MTERF2Q49AM1 385 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 KHDC1Q4VXA5 237 aaKnown RBP10.28□□□□□ -0.76
CD44-206ENST00000415148 TXNRD3NBQ6F5E7 133 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 LVRNQ6Q4G3 990 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 DSTYKQ6XUX3 929 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 MTDHQ86UE4 582 aaKnown RBP10.28□□□□□ -0.76
CD44-206ENST00000415148 PYROXD1Q8WU10 500 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 NRG4Q8WWG1 115 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 MCEEQ96PE7 176 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 KLF6Q99612 283 aaPredicted RBP10.28□□□□□ -0.76
CD44-206ENST00000415148 NPHS2Q9NP85 383 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 DCTN4Q9UJW0 460 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 ZNRF3Q9ULT6 936 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 ADAMTS5Q9UNA0 930 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 TELO2Q9Y4R8 837 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 RIPK3Q9Y572 518 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 PARP14Q460N5 1801 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 C3orf70A6NLC5 250 aaPredicted RBP10.28□□□□□ -0.76
CD44-206ENST00000415148 GOLGA8RI6L899 631 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 KRT4P19013 534 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 POLR2BP30876 1174 aaKnown RBP10.28□□□□□ -0.76
CD44-206ENST00000415148 RFC5P40937 340 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 CTCFP49711 727 aaPredicted RBP10.28□□□□□ -0.76
CD44-206ENST00000415148 TGFB2P61812 414 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 PLCB3Q01970 1234 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 TNFAIP1Q13829 316 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 CTC1Q2NKJ3 1217 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 ZPBP2Q6X784 338 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 ANKMY2Q8IV38 441 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 NAT8LQ8N9F0 302 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 ASAP3Q8TDY4 903 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 FNIP1Q8TF40 1166 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 PTPRN2Q92932 1015 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 ZBTB45Q96K62 511 aaPredicted RBP10.28□□□□□ -0.76
CD44-206ENST00000415148 ACSS3Q9H6R3 686 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 METTL5Q9NRN9 209 aaKnown RBP10.28□□□□□ -0.76
CD44-206ENST00000415148 ANKFY1Q9P2R3 1169 aa10.28□□□□□ -0.76
CD44-206ENST00000415148 LRRD1A4D1F6 860 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 SIGLEC16A6NMB1 481 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 OATP04181 439 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 ADRA1DP25100 572 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 RXRBP28702 533 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 ICAM3P32942 547 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 OGDHQ02218 1023 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 SEPT7Q16181 437 aaKnown RBP10.27□□□□□ -0.77
CD44-206ENST00000415148 HADHQ16836 314 aaKnown RBP10.27□□□□□ -0.77
CD44-206ENST00000415148 C11orf91Q3C1V1 193 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 CIAPIN1Q6FI81 312 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 CCDC125Q86Z20 511 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 BRSK2Q8IWQ3 736 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 TTLL6Q8N841 843 aa10.27□□□□□ -0.77
CD44-206ENST00000415148 REPS2Q8NFH8 660 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms