RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 PHLDB3Q6NSJ2 640 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 SV2AQ7L0J3 742 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 MFSD6LQ8IWD5 586 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 GUF1Q8N442 669 aaKnown RBP10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 MAB21L3Q8N8X9 362 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 ENGASEQ8NFI3 743 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 SYAP1Q96A49 352 aaPredicted RBP10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 CCDC34Q96HJ3 373 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 ZFYVE19Q96K21 471 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 XYLT2Q9H1B5 865 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 TASP1Q9H6P5 420 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 SMYD3Q9H7B4 428 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 TRPC7Q9HCX4 862 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 PCDHA5Q9Y5H7 936 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 MYH15Q9Y2K3 1946 aa10.88□□□□□ -0.67
NCKIPSD-202ENST00000413374 DOCK6Q96HP0 2047 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 TACC1O75410 805 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 PRAMEF12O95522 483 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 CSH1P0DML2 217 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 CSH2P0DML3 217 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 GLULP15104 373 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 ATICP31939 592 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 PRCPP42785 496 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 GCLMP48507 274 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 MRE11P49959 708 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 NLRP12P59046 1061 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 PRKCQQ04759 706 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 FAM160A1Q05DH4 1040 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 ZNF667Q5HYK9 610 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 C1orf220Q5T0J3 134 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 C4orf50Q6ZRC1 276 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 TMEM150AQ86TG1 271 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 CCDC105Q8IYK2 499 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 FAM186BQ8IYM0 893 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 PJA1Q8NG27 643 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 SPATA18Q8TC71 538 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 TMC2Q8TDI7 906 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 SMARCE1Q969G3 411 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 PCED1BQ96HM7 432 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 CYP2S1Q96SQ9 504 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 MED10Q9BTT4 135 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 SDCBP2Q9H190 292 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 TRPV4Q9HBA0 871 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 NDRG2Q9UN36 371 aaKnown RBP10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 SCN1AP35498 2009 aa10.87□□□□□ -0.67
NCKIPSD-202ENST00000413374 SMC2O95347 1197 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 ABL1P00519 1130 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 HLA-DRAP01903 254 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 KRT13P13646 458 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 RPL13P26373 211 aaKnown RBP10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 TARSP26639 723 aaKnown RBP10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 PSMC2P35998 433 aaKnown RBP10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 PIK3CAP42336 1068 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 SOX9P48436 509 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 KPNA1P52294 538 aaPredicted RBP10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 AP3M2P53677 418 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 CACNA2D1P54289 1103 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 USP46P62068 366 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 CLDN10P78369 228 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 PPP3CAQ08209 521 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 IFRD2Q12894 506 aaPredicted RBP10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 ANGPT1Q15389 498 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 MAPRE1Q15691 268 aaKnown RBP10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 SGSM1Q2NKQ1 1148 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 ZACNQ401N2 412 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 CFAP221Q4G0U5 840 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 ANKRD40Q6AI12 368 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 ZNF852Q6ZMS4 543 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 CMTM8Q8IZV2 173 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 MYCBPAPQ8TBZ2 947 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 CSGALNACT1Q8TDX6 532 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 DEPDC1BQ8WUY9 529 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 MRPS31Q92665 395 aaKnown RBP10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 IRF7Q92985 503 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 B3GNT5Q9BYG0 378 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 ZNF518BQ9C0D4 1074 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 ABCB6Q9NP58 842 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 LTB4R2Q9NPC1 389 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 RMND1Q9NWS8 449 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 CCL26Q9Y258 94 aa10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 PDCD11Q14690 1871 aaKnown RBP10.86□□□□□ -0.67
NCKIPSD-202ENST00000413374 NOTCH4Q99466 2003 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 COL4A3Q01955 1670 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 SHISA7A6NL88 538 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 F8VP50 259 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 IKBKBO14920 756 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 CETN3O15182 167 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 NOL4O94818 638 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 STAU1O95793 577 aaKnown RBP10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 CCNE1P24864 410 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 ANXA13P27216 316 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 AVPR1AP37288 418 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 NUBP1P53384 320 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 PMS1P54277 932 aaKnown RBP10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 TNK2Q07912 1038 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 ZNF658Q5TYW1 1059 aaPredicted RBP10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 ACOT1Q86TX2 421 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 B3GALNT2Q8NCR0 500 aa10.85□□□□□ -0.67
NCKIPSD-202ENST00000413374 BPIFB1Q8TDL5 484 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms