RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 NCOR2Q9Y618 2525 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 MYOFQ9NZM1 2061 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 TGFB1I1O43294 461 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 PPP6R2O75170 966 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 TMEM191BP0C7N4 346 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 CSH1P0DML2 217 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 CSH2P0DML3 217 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 NRLP54845 237 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 PLCB2Q00722 1185 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 MYL7Q01449 175 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 LRRC32Q14392 662 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 ITPRIPL2Q3MIP1 535 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 FAM171BQ6P995 826 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 C1orf228Q6PIY5 440 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 TOP6BLQ8N6T0 577 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 EBF3Q9H4W6 596 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 ABCB6Q9NP58 842 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 HSPBP1Q9NZL4 362 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 NME7Q9Y5B8 376 aa20.62■□□□□ 0.89
CPSF7-204ENST00000413232 ZNF233A6NK53 670 aa20.61■□□□□ 0.89
CPSF7-204ENST00000413232 NOL4O94818 638 aa20.61■□□□□ 0.89
CPSF7-204ENST00000413232 ARSAP15289 507 aa20.61■□□□□ 0.89
CPSF7-204ENST00000413232 AVPR1AP37288 418 aa20.61■□□□□ 0.89
CPSF7-204ENST00000413232 PUM1Q14671 1186 aaKnown RBP eCLIP20.61■□□□□ 0.89
CPSF7-204ENST00000413232 FOXD4L6Q3SYB3 417 aaPredicted RBP20.61■□□□□ 0.89
CPSF7-204ENST00000413232 DGKKQ5KSL6 1271 aa20.61■□□□□ 0.89
CPSF7-204ENST00000413232 NAIF1Q69YI7 327 aaPredicted RBP20.61■□□□□ 0.89
CPSF7-204ENST00000413232 HEATR6Q6AI08 1181 aaKnown RBP20.61■□□□□ 0.89
CPSF7-204ENST00000413232 FOXD4L3Q6VB84 417 aaPredicted RBP20.61■□□□□ 0.89
CPSF7-204ENST00000413232 DGLUCYQ7Z3D6 616 aa20.61■□□□□ 0.89
CPSF7-204ENST00000413232 MON1AQ86VX9 555 aa20.61■□□□□ 0.89
CPSF7-204ENST00000413232 ZNF507Q8TCN5 953 aa20.61■□□□□ 0.89
CPSF7-204ENST00000413232 HPDLQ96IR7 371 aa20.61■□□□□ 0.89
CPSF7-204ENST00000413232 MYRFLQ96LU7 910 aa20.61■□□□□ 0.89
CPSF7-204ENST00000413232 CYP2S1Q96SQ9 504 aa20.61■□□□□ 0.89
CPSF7-204ENST00000413232 FBRSL1Q9HCM7 1045 aaKnown RBP20.61■□□□□ 0.89
CPSF7-204ENST00000413232 CRTAC1Q9NQ79 661 aa20.61■□□□□ 0.89
CPSF7-204ENST00000413232 TDP1Q9NUW8 608 aa20.61■□□□□ 0.89
CPSF7-204ENST00000413232 PAPSS2O95340 614 aaPredicted RBP20.6■□□□□ 0.89
CPSF7-204ENST00000413232 CST3P01034 146 aaPredicted RBP20.6■□□□□ 0.89
CPSF7-204ENST00000413232 LHX1P48742 406 aa20.6■□□□□ 0.89
CPSF7-204ENST00000413232 PSMC1P62191 440 aaKnown RBP20.6■□□□□ 0.89
CPSF7-204ENST00000413232 ASIC1P78348 528 aa20.6■□□□□ 0.89
CPSF7-204ENST00000413232 EHHADHQ08426 723 aa20.6■□□□□ 0.89
CPSF7-204ENST00000413232 RUNX3Q13761 415 aa20.6■□□□□ 0.89
CPSF7-204ENST00000413232 PPP2R5DQ14738 602 aa20.6■□□□□ 0.89
CPSF7-204ENST00000413232 FSTL4Q6MZW2 842 aa20.6■□□□□ 0.89
CPSF7-204ENST00000413232 RDH13Q8NBN7 331 aa20.6■□□□□ 0.89
CPSF7-204ENST00000413232 MRPS31Q92665 395 aaKnown RBP20.6■□□□□ 0.89
CPSF7-204ENST00000413232 ANKRD36BP1Q96IX9 119 aa20.6■□□□□ 0.89
CPSF7-204ENST00000413232 THG1LQ9NWX6 298 aaKnown RBP20.6■□□□□ 0.89
CPSF7-204ENST00000413232 KIAA0391O15091 583 aaKnown RBP20.59■□□□□ 0.89
CPSF7-204ENST00000413232 CLIC2O15247 247 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 CUTAO60888 179 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 YEATS4O95619 227 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 DDX6P26196 483 aaKnown RBP eCLIP20.59■□□□□ 0.89
CPSF7-204ENST00000413232 RPL10AP62906 217 aaKnown RBP20.59■□□□□ 0.89
CPSF7-204ENST00000413232 DUOXA2Q1HG44 320 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 CFAP221Q4G0U5 840 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 CNNM4Q6P4Q7 775 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 PRR23BQ6ZRT6 265 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 SPATA2LQ8IUW3 424 aaPredicted RBP20.59■□□□□ 0.89
CPSF7-204ENST00000413232 SCN4BQ8IWT1 228 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 SPATA18Q8TC71 538 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 SCFD1Q8WVM8 642 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 TRMT2BQ96GJ1 504 aaKnown RBP20.59■□□□□ 0.89
CPSF7-204ENST00000413232 ZNF396Q96N95 335 aaPredicted RBP20.59■□□□□ 0.89
CPSF7-204ENST00000413232 C7orf25Q9BPX7 421 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 GZF1Q9H116 711 aaPredicted RBP20.59■□□□□ 0.89
CPSF7-204ENST00000413232 AGPAT3Q9NRZ7 376 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 POLR3BQ9NW08 1133 aaPredicted RBP20.59■□□□□ 0.89
CPSF7-204ENST00000413232 ZMYM5Q9UJ78 669 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 KIAA1549LQ6ZVL6 1849 aa20.59■□□□□ 0.89
CPSF7-204ENST00000413232 EIF3DO15371 548 aaKnown RBP eCLIP20.58■□□□□ 0.89
CPSF7-204ENST00000413232 PDGFRBP09619 1106 aa20.58■□□□□ 0.89
CPSF7-204ENST00000413232 PCSK1P29120 753 aa20.58■□□□□ 0.89
CPSF7-204ENST00000413232 SPEM2Q0P670 501 aa20.58■□□□□ 0.89
CPSF7-204ENST00000413232 TMEM196Q5HYL7 178 aa20.58■□□□□ 0.89
CPSF7-204ENST00000413232 FAM26FQ5R3K3 315 aa20.58■□□□□ 0.89
CPSF7-204ENST00000413232 DPH6Q7L8W6 267 aa20.58■□□□□ 0.89
CPSF7-204ENST00000413232 TRAPPC11Q7Z392 1133 aa20.58■□□□□ 0.89
CPSF7-204ENST00000413232 NELFCDQ8IXH7 590 aa20.58■□□□□ 0.89
CPSF7-204ENST00000413232 MYLPFQ96A32 169 aa20.58■□□□□ 0.89
CPSF7-204ENST00000413232 SYT15Q9BQS2 421 aa20.58■□□□□ 0.89
CPSF7-204ENST00000413232 BLZF1Q9H2G9 400 aa20.58■□□□□ 0.89
CPSF7-204ENST00000413232 CUEDC2Q9H467 287 aa20.58■□□□□ 0.89
CPSF7-204ENST00000413232 C2orf78A6NCI8 922 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 SOBPA7XYQ1 873 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 POLR2DO15514 142 aaKnown RBP20.57■□□□□ 0.88
CPSF7-204ENST00000413232 TNNC2P02585 160 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 BDNFP23560 247 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 USP46P62068 366 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 MYO1EQ12965 1108 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 PKP1Q13835 747 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 SIM2Q14190 667 aaPredicted RBP20.57■□□□□ 0.88
CPSF7-204ENST00000413232 ZNF268Q14587 947 aaPredicted RBP20.57■□□□□ 0.88
CPSF7-204ENST00000413232 SURF1Q15526 300 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 SNRNP35Q16560 246 aaKnown RBP20.57■□□□□ 0.88
CPSF7-204ENST00000413232 STXBP4Q6ZWJ1 553 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 LONP2Q86WA8 852 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms