RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 SLFN11Q7Z7L1 901 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 METTL23Q86XA0 190 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 C7orf61Q8IZ16 206 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 MSANTD4Q8NCY6 345 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 ZNF564Q8TBZ8 553 aaPredicted RBP7.04□□□□□ -1.28
VPS41-204ENST00000413141 SLC2A14Q8TDB8 520 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 TOP1MTQ969P6 601 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 ZNF689Q96CS4 500 aaPredicted RBP7.04□□□□□ -1.28
VPS41-204ENST00000413141 CPXM1Q96SM3 734 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 RTP3Q9BQQ7 232 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 SYT15Q9BQS2 421 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 TMEM175Q9BSA9 504 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 GOLPH3Q9H4A6 298 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 CRTAC1Q9NQ79 661 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 HESX1Q9UBX0 185 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 TJP2Q9UDY2 1190 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 PRKAG2Q9UGJ0 569 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 CHORDC1Q9UHD1 332 aaPredicted RBP7.04□□□□□ -1.28
VPS41-204ENST00000413141 ADAM28Q9UKQ2 775 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 CDH9Q9ULB4 789 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 STRIP2Q9ULQ0 834 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 JRKLQ9Y4A0 524 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 SCINQ9Y6U3 715 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 KIAA1671Q9BY89 1806 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 SF3B1O75533 1304 aaKnown RBP eCLIP7.03□□□□□ -1.281e-8■■■■■ 51.8
VPS41-204ENST00000413141 TULP2O00295 520 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 SYN3O14994 580 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 TRAPPC3O43617 180 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 NCK2O43639 380 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 ATP2C2O75185 946 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 URI1O94763 535 aaPredicted RBP7.03□□□□□ -1.28
VPS41-204ENST00000413141 UPP2O95045 317 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 ERBB2P04626 1255 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 PTPN1P18031 435 aaKnown RBP7.03□□□□□ -1.28
VPS41-204ENST00000413141 PBX3P40426 434 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 GABRB2P47870 512 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 BCAR1P56945 870 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 YWHAHQ04917 246 aaPredicted RBP7.03□□□□□ -1.28
VPS41-204ENST00000413141 PDE4CQ08493 712 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 BST2Q10589 180 aaKnown RBP7.03□□□□□ -1.28
VPS41-204ENST00000413141 MAMLD1Q13495 774 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 INTS6LQ5JSJ4 861 aaKnown RBP7.03□□□□□ -1.28
VPS41-204ENST00000413141 PPP1R15BQ5SWA1 713 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 CYP4A22Q5TCH4 519 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 MEI1Q5TIA1 1274 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 PAPD7Q5XG87 772 aaKnown RBP7.03□□□□□ -1.28
VPS41-204ENST00000413141 DNAJC24Q6P3W2 148 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 C16orf59Q7L2K0 433 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 TMCO2Q7Z6W1 182 aaPredicted RBP7.03□□□□□ -1.28
VPS41-204ENST00000413141 DAAM2Q86T65 1068 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 FAM35AQ86V20 835 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 TMEM173Q86WV6 379 aaPredicted RBP7.03□□□□□ -1.28
VPS41-204ENST00000413141 ERICH1Q86X53 443 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 XYLT1Q86Y38 959 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 SYCE1Q8N0S2 351 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 FUKQ8N0W3 1084 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 ANKRD52Q8NB46 1076 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 C3orf20Q8ND61 904 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 OR10T2Q8NGX3 314 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 UBA3Q8TBC4 463 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 IPO4Q8TEX9 1081 aaKnown RBP7.03□□□□□ -1.28
VPS41-204ENST00000413141 BCL7CQ8WUZ0 217 aaPredicted RBP7.03□□□□□ -1.28
VPS41-204ENST00000413141 BADQ92934 168 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 MYLPFQ96A32 169 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 PKMYT1Q99640 499 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 HNRNPABQ99729 332 aaKnown RBP7.03□□□□□ -1.28
VPS41-204ENST00000413141 ACBD6Q9BR61 282 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 COLEC11Q9BWP8 271 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 TLR10Q9BXR5 811 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 CWH43Q9H720 699 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 SYNCQ9H7C4 482 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 L2HGDHQ9H9P8 463 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 KRT82Q9NSB4 513 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 PARVAQ9NVD7 372 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 ANAPC7Q9UJX3 599 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 MRFAP1Q9Y605 127 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 PATJQ8NI35 1801 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 VWA8A3KMH1 1905 aa7.03□□□□□ -1.28
VPS41-204ENST00000413141 NLRC5Q86WI3 1866 aa7.02□□□□□ -1.28
VPS41-204ENST00000413141 MKI67P46013 3256 aaKnown RBP7.02□□□□□ -1.29
VPS41-204ENST00000413141 MYBPHLA2RUH7 354 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 E5RJQ4 531 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 CLDN5O00501 218 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 XPO1O14980 1071 aaKnown RBP7.02□□□□□ -1.29
VPS41-204ENST00000413141 TADA2AO75478 443 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 OAZ2O95190 189 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 GJB6O95452 261 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 GALTP07902 379 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 FAM200BP0CF97 657 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 NPR3P17342 541 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 FGFR3P22607 806 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 PLA2G4AP47712 749 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 RPL34P49207 117 aaKnown RBP7.02□□□□□ -1.29
VPS41-204ENST00000413141 RGS7P49802 495 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 PLCB3Q01970 1234 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 TAP1Q03518 808 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 ELAVL2Q12926 359 aaKnown RBP7.02□□□□□ -1.29
VPS41-204ENST00000413141 PTPROQ16827 1216 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 VARS2Q5ST30 1063 aaKnown RBP7.02□□□□□ -1.29
VPS41-204ENST00000413141 PMF1Q6P1K2 205 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms